Transcript Information: R_Transcript_112556.p1


Annotated TAIR IDAT1G65260.1
Annotated Gene Nameplastid transcriptionally active 4
Annotated Gene Symbol(s)PTAC4, VIPP1
Annotation TypeOrtholog
Chromosome Positionchr1:24236329-24240428 | Forward length=330
E-Value3.4E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.366652686316
Replicate 223.850782346006
Replicate 322.491509724319
Condition 2: 8 Hour
Replicate 121.378897189589
Replicate 226.076436225673
Replicate 323.964513115133
Condition 3: 24 Hour
Replicate 119.143065845457
Replicate 216.791314925757
Replicate 320.36680677814


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112556.p1 GENE.R_Transcript_112556~~R_Transcript_112556.p1 ORF type:complete len:331 (+),score=92.42,PspA_IM30|PF04012.8|1.1e-52,PspA_IM30|PF04012.8|3.7e+02 R_Transcript_112556:431-1423(+)
ATGGCTACACAGCAACAAGCACCGCCTATGACAGGCTTGAAGTTTACTACTGCTACAGTGCCTGGTCCTTCACATAGGCTTTCTGTTGTGAGAGTTTGTTTGAGGTCTTCTTTTTTTGGCAACAATGTGGGAGCATTAAGAGTGAATGTAATTCGTTTAGCTCACTCAAATAGACTGAGGTGTAATGGCCATGGTGAGGGTGCTACGATGAACCTATTTGATCGGTTCGCTAGGGTCGTTAAGTCATATGCGAATGCAATTCTAAGCACTTTCGAAGATCCTGAGAAGATACTGGAACAAACAGTGCTTGAGATGAATGAGGACTTGACAAAGATGCGCCAATCTACAGCGCAAGTGTTGGCATCGCAAAAACAGTTGGAAAACAAGTATAAAGCTGCGCAACAAGCTTCTGAAGACTGGTACAAAAGGGCACAACTTGCACTTAACAAAGGGGATGAGGACCTTGCTCGTGAAGCTTTGAAGAGGCGCAAATCTTATGCTGATAATGCTAATGCCTTGAAAGCCCAGCTTGATCAGCAAAAGGGTGTTGTTGAATCTCTTGTCTCAAATACTAAGCTTTTGGAAAGCAAGATACAAGAGGCAAAGTCAAAGAAAGATACACTAAAAGCACGTGCTCAGTCTGCAAGGACTGCTACCAAAGTAAGTGAGATGGTGGGGAAAGTGAATACTAGTGGTGCTCTTGCTGCTTTTGAGAAAATGGAAGAAAAAGTGTTGGCTATGGAATCAGAAGCAGATGCACTTAATCAGTTAACCAGTGATGAGCTTGAAGGAAAGTTTGCATTGCTGGAGGGCTCATCTGTGGACGAGGACCTTCTTAACTTGAAGAAGGAATTGTCTGGCAGCTCAACGAAAGGAGAGCTCCCACCAGGGAGAACAGCTGTTGCGAGCTCAACAAACGCGGCAGCAGCCTTCCGAGACATGGATGTTGAGAAAGAGCTAAATGAGCTCCGGAGAAGAGCCCAAGATTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112556.p1 GENE.R_Transcript_112556~~R_Transcript_112556.p1 ORF type:complete len:331 (+),score=92.42,PspA_IM30|PF04012.8|1.1e-52,PspA_IM30|PF04012.8|3.7e+02 R_Transcript_112556:431-1423(+)
MATQQQAPPMTGLKFTTATVPGPSHRLSVVRVCLRSSFFGNNVGALRVNVIRLAHSNRLRCNGHGEGATMNLFDRFARVVKSYANAILSTFEDPEKILEQTVLEMNEDLTKMRQSTAQVLASQKQLENKYKAAQQASEDWYKRAQLALNKGDEDLAREALKRRKSYADNANALKAQLDQQKGVVESLVSNTKLLESKIQEAKSKKDTLKARAQSARTATKVSEMVGKVNTSGALAAFEKMEEKVLAMESEADALNQLTSDELEGKFALLEGSSVDEDLLNLKKELSGSSTKGELPPGRTAVASSTNAAAAFRDMDVEKELNELRRRAQDY*

Click here to download the sequence:
Link to NCBI Protein BLAST