Transcript Information: R_Transcript_11258.p1


Annotated TAIR IDAT5G65450.1
Annotated Gene Nameubiquitin-specific protease 17
Annotated Gene Symbol(s)UBP17
Annotation TypeOrtholog
Chromosome Positionchr5:26157863-26161096 | Forward length=731
E-Value3.4E-161
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5418307573868
Replicate 26.3531241112046
Replicate 38.5090218376852
Condition 2: 8 Hour
Replicate 17.2885354455515
Replicate 28.8013311060017
Replicate 310.605184556807
Condition 3: 24 Hour
Replicate 19.9963883869708
Replicate 27.5145224018326
Replicate 39.2612182193022


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11258.p1 GENE.R_Transcript_11258~~R_Transcript_11258.p1 ORF type:complete len:813 (+),score=133.89,UCH|PF00443.25|3e-38,UCH_1|PF13423.2|1.4e+03,UCH_1|PF13423.2|2.7e-20,zf-MYND|PF01753.14|6.4e-10,zf-MYND|PF01753.14|1.4e+04,zf-MYND|PF01753.14|1.5e+03,zf-MYND|PF01753.14|2.2e+02 R_Transcript_11258:498-2936(+)
ATGCTAGGAATTCCGGTGCTACTTTCCGTAGCGCTGTTGATTATCACCGTCTTTGTTAGGTGGAGGTTCAAGGATGATGATGACGTCGTACATAAAAAATTGGAGAAGTTTCCGAACCTTCAAGTGGAACCACAACATTCTATTGACCATCCTCCTCGAGAGAATATAGTGACTCAAGTTGATGCGTTTGGATTCGATGAATTCAGGCCCACTGTAGTGTCTGGTCGTCATCAGTGTGCTCTTTGCTTCTCTCCTACTAATACCCGTTGCTCTCGTTGCAAGGCTGTCCGTTACTGTTCTAGCAAGTGCCAAATTGCTCACTGGAGACAAGGTCACAAGTATGAGTGTTATCCTCGAGACCCCAATGTATTCGAGGTAGATAATTCTAGTGGAAATGTAGACACTGGAGGGGATTGTGAGAGAAACAGCATTGACTCTACCAAAAGTTTGTCAAATATGAATGACAAGGGCACAATTAATCAGAGGCATTCTGATCTTTCAGATTCCCATATTACGATACCTCGTCTATCCACAGTGTCAAATGATTCCTCAGACAACACAATTGGACGAGATTCAACAGGTGAACGGGAGGAACATGTTTTAGACCTGAAGACTCCTATTATGGTCCGCAAGGTAGACAAGAGTAGCATAGCGGATTTTAATATACCATTAAACTCACAGTCTGCAAGTTTTGGGAATTCAGTGGACATTTCGAACAAAGAGAAAGTAAGGCAAAGTCATGGAACAAAGGCTAGAGCTTTTCACTCAGACCCTTCACCACACATGAAGAAAGATAAGTCTTCTGAGGGTGCGGTCTTAGGCTACAAGTCCCAGTCACAGGAGGTTGAAGATGTCGATCCTTCATTAAATGAAAGACAAAAGCATTCACATGCCTTCAAGTATAAAGAAGCGAAGTCCTTGGCTAAAAAGCAATCTGGTGGTGGTTTTTTGCCAGCGAAAGGTGGGAGTAGCTCAAGCCACTTGCCAACTGATGGCTTTAAGTCGTCTCTTGCAAAGGTTGTGCGACATCTTAAACCTATTCATCAGAAGAAGCCCCCTATTAAAAGTACCGTGCTTGAGGCTCCGTCGAAACACAGTTGCAAGGTTGTGTTTCCGTATGAATCTTTCACAAGATTATACTCTTCAAATGAAGTAGACTTGAAACCATTTGGTCTTATAAACTGCGGGAATAGCTGCTATGCAAATGCTGTGCTCCAATGCCTTGCCTACACTCGACCTTTGACATTGTTTCTTCTTCAAGGGCTACATTCAAAAGGATGCTGGAAGGAAGACTGGTGTTTCACATGTGAATTTGAACATCTTATGTCGAAGGCAAGGGATGGACAAAGTCCTCTCTCTCCAGTCCAGATCCTCTCCAACATCACTCATCTTGGTCATGGAAGAGAGGAAGATGCCCATGAGTTTTTGAGGTATGCTGTTGAGGCTATGCAATCTGCTTGCATTGAGCAAGCTGGCATTTCAGGTCCAGTGGCAGAGGAAACCACTCTTATAGGGATGACGTTTGGGGGATACCTTCTCTCTAAGATAAAATGTATGAAGTGCCACAATAGATCAGAGAAGTATGAGAGGATGATGGATCTTTCTGTGGAGATTGGTGGAGACATTAGAACTCTTGAACAGGCACTTAAAAGGTTTACAGCTTCCGAAATTTTGGAGGGTGATAACAAATACCACTGTAGCAGATGTAAATCTTATGAGAAGGCCAAGAAAAAATTGACTGTGTTTCAAGCGCCCAACATCCTCACAGTAGTGCTGAAGCGATTTCAGGCGGACAGTTTCACAAAGTTAAAAAAGCCTGTTCGGTTTCCAGAAACTCTGAACATGACTCCGTATATGAGTCACACAAGCGATAGATTCCCCGAATATATTCTGTATGCGGTGGTTGTTCATTTAGATGTCAGGAATGCTTCCTATTCTGGTCATTATGTGTGCTACGTGAAAAATTACCGTGATGAGTGGTTCAAGATTGATGACAATGTGGTTATTAGTGTGGATGTGAGAAGGGTCTTATCCGAAGAGGCATACATGCTTCTCTATGCAAGGCATTCTCCAATGTTTCCAGCTCTGATTGGCAACACTCACGATGACAAACTTGCTGCGAATCTGGAAGCTGGTCCTCGCCCTAGCTATTTGAAATCAGCTATACCAAAAGCTAGGCGTCATAGCTCAGATTTCAGTGCTGATCCTTCAATGATTCAGCAACAGTCAATTAGGAATGGTCATTTGAAGAATCCCTCATATCTAGAGGAGTGGGTAACTCACTCTGTTGAAAGCATACCAATGATGGATTCATCGAGTGAGTCTTCTTTGTTCAGTTGTTCGGAAGAAGGTACATGTAGTACGCCAAGCACAAAAGATTCTGGTAGTGTTGAAGATTTCTCTGATTACATATTTGGCAGAGGCAGTGCTGCTCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11258.p1 GENE.R_Transcript_11258~~R_Transcript_11258.p1 ORF type:complete len:813 (+),score=133.89,UCH|PF00443.25|3e-38,UCH_1|PF13423.2|1.4e+03,UCH_1|PF13423.2|2.7e-20,zf-MYND|PF01753.14|6.4e-10,zf-MYND|PF01753.14|1.4e+04,zf-MYND|PF01753.14|1.5e+03,zf-MYND|PF01753.14|2.2e+02 R_Transcript_11258:498-2936(+)
MLGIPVLLSVALLIITVFVRWRFKDDDDVVHKKLEKFPNLQVEPQHSIDHPPRENIVTQVDAFGFDEFRPTVVSGRHQCALCFSPTNTRCSRCKAVRYCSSKCQIAHWRQGHKYECYPRDPNVFEVDNSSGNVDTGGDCERNSIDSTKSLSNMNDKGTINQRHSDLSDSHITIPRLSTVSNDSSDNTIGRDSTGEREEHVLDLKTPIMVRKVDKSSIADFNIPLNSQSASFGNSVDISNKEKVRQSHGTKARAFHSDPSPHMKKDKSSEGAVLGYKSQSQEVEDVDPSLNERQKHSHAFKYKEAKSLAKKQSGGGFLPAKGGSSSSHLPTDGFKSSLAKVVRHLKPIHQKKPPIKSTVLEAPSKHSCKVVFPYESFTRLYSSNEVDLKPFGLINCGNSCYANAVLQCLAYTRPLTLFLLQGLHSKGCWKEDWCFTCEFEHLMSKARDGQSPLSPVQILSNITHLGHGREEDAHEFLRYAVEAMQSACIEQAGISGPVAEETTLIGMTFGGYLLSKIKCMKCHNRSEKYERMMDLSVEIGGDIRTLEQALKRFTASEILEGDNKYHCSRCKSYEKAKKKLTVFQAPNILTVVLKRFQADSFTKLKKPVRFPETLNMTPYMSHTSDRFPEYILYAVVVHLDVRNASYSGHYVCYVKNYRDEWFKIDDNVVISVDVRRVLSEEAYMLLYARHSPMFPALIGNTHDDKLAANLEAGPRPSYLKSAIPKARRHSSDFSADPSMIQQQSIRNGHLKNPSYLEEWVTHSVESIPMMDSSSESSLFSCSEEGTCSTPSTKDSGSVEDFSDYIFGRGSAAR*

Click here to download the sequence:
Link to NCBI Protein BLAST