Transcript Information: R_Transcript_112589.p1


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value7E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4410232332673
Replicate 20.55253422148153
Replicate 30.86653777090708
Condition 2: 8 Hour
Replicate 10.80545608379096
Replicate 20.84588862228169
Replicate 31.5822950047377
Condition 3: 24 Hour
Replicate 11.8124584653451
Replicate 21.2333532932231
Replicate 31.5479791143694


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112589.p1 GENE.R_Transcript_112589~~R_Transcript_112589.p1 ORF type:complete len:608 (+),score=94.51,LRR_4|PF12799.3|6.1e+03,LRR_4|PF12799.3|9e-05,LRR_4|PF12799.3|9.5e+02,LRR_4|PF12799.3|2.4e+02,LRR_4|PF12799.3|25 R_Transcript_112589:75-1898(+)
ATGACTAAACCAAAAGAACCACCTCTTCATTCTCTCTTTCAAATCAGTTCATCACTAGCACAACAGCTAGCACTTCTACGAGATGACAAAAAGCGCGAAAATATTCCTGGTGATCAAGTCTTGGAAAAGACTAAGGAGTGCATAAAAAAATTGGAACAATGGGATACTGATAAAGATCAAGTTCTTATAGTTGAGTCCAAGAAGAAGGTTTGGGAGAAACTAGCTAAAACAATTCAACAAGAGTTCATCAAGTATGACAAAAAAAACGAATCTGAATACCATAAATTGCTCGAATCTCCTTGCTTTAAATCCCTTCAACAAGAACCAACAAAACAACAAGAAGATAGTTCTAATTATAACATTGCTGATGATGACCAATTCGAGGATTTTGAAGGTAAATTCAACCAACTTTGTGATACAGAGAGAGAATGTTTATATTGGTTCTCTTTGTTTCCTAAGGGAACAGCCACAAAAAGGAAAGAATTGATATGGTGGTGGGAAGAGAGTGAAAAGCCAAAACTTGATAGTCATAATAATGAAGGTGAAGAAATACTTGGTAAGCTTTATGCTAAGGGCTTTATTAAACGTGACAAAAGTAATAAAAGGATACCAGTCACGTACACATTGCATGAAAATATTTGGTTGGACTTAAAAAAGAAAGCAAGTAAATGGTGTGAGTATGTGTGTGTGCTTGAAAAAAAGGACAAAACAACTAAATTATTGAAGCCAGTTGTTGAAAATGGGGAAAAAGCTGATATAACAGTTGGTACTGGGTTGTATATCATGATCAACATAAGTGCAAATAAACTTGATAAAGATATAGAAATGCCAGGTGGTGTTTTTTTTCGCATTCTATTATTTGGAAGCTGGAAGCATGGGGAACAAATGGATTATATTGAGGTGGAAAACCTTGATTCGCTTATTTCTAAATGGTGTGATAAGTCTCAGGTAAAGTACTTGAGCCTTCGAGGGATAACAGGGATAGTGACCTTGTCAAAAAATATTTACGGCTTTGGAAAACTAAGGTTCTTGGATCTGAGGGCATGTAACAACTTGGAATCAATTCCAGAGGGGATTGAAGGGCTAAAACAACTTGTACATTTGGATTTGTCTGAATGTTATCTTCTTGATCAAGTTCCTAAAGGGATTGCTAAGTTATATAATCTTCAAGTGTTAAAGGGGTTTGTAATCAAACAAGATCCACCAAAAGTACAAAAAACCAACAACAACAATAATACTAATGATTTTGGAGATAATACTTCATGTACATTCAAGGATTTGTCCCATTTGAAGCTCTTGAGGAAACTTACAATTCGTACAAGAAGAATGAATTTTCCAACAAGTGATGATCTTCACACTTTATCCACAATGATTGACCTCAATAGTTTGGGAATTAAATGGGTGACAAGTTCTACTTCTAATACTCATACTAATTCTAATGCTCATGATCATACTCAGATAGTAACTATTGAAGAGGATGAAGATTCAGGAAGATTCCCCCCGAACCTCGAAAAGCTCGACCTCCAAGCCATGCCTGCAGAACAAGTGAAAAACCGAGTATTGGGGCGCATTCGAGAGACATCAATTAGCCTGAGAAAACTCTCCATAAGAGGAGGGGATATCAATGACCTTGGTCCAATGGAGTATTGTTTTGAGGGTGTTGAGTTTGTGCGTCTTAGATACTTGGAGAAACTATCAATGACTTGGAAAGACTTCATACACTCCTTCACTAACTTGACTCGCTTGGAGATGCACCGATGTCCTAAGCTCGAGAGCATGTCATTTCCATGTGATAATAATGGTGTCTTTCAAAGAGCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112589.p1 GENE.R_Transcript_112589~~R_Transcript_112589.p1 ORF type:complete len:608 (+),score=94.51,LRR_4|PF12799.3|6.1e+03,LRR_4|PF12799.3|9e-05,LRR_4|PF12799.3|9.5e+02,LRR_4|PF12799.3|2.4e+02,LRR_4|PF12799.3|25 R_Transcript_112589:75-1898(+)
MTKPKEPPLHSLFQISSSLAQQLALLRDDKKRENIPGDQVLEKTKECIKKLEQWDTDKDQVLIVESKKKVWEKLAKTIQQEFIKYDKKNESEYHKLLESPCFKSLQQEPTKQQEDSSNYNIADDDQFEDFEGKFNQLCDTERECLYWFSLFPKGTATKRKELIWWWEESEKPKLDSHNNEGEEILGKLYAKGFIKRDKSNKRIPVTYTLHENIWLDLKKKASKWCEYVCVLEKKDKTTKLLKPVVENGEKADITVGTGLYIMINISANKLDKDIEMPGGVFFRILLFGSWKHGEQMDYIEVENLDSLISKWCDKSQVKYLSLRGITGIVTLSKNIYGFGKLRFLDLRACNNLESIPEGIEGLKQLVHLDLSECYLLDQVPKGIAKLYNLQVLKGFVIKQDPPKVQKTNNNNNTNDFGDNTSCTFKDLSHLKLLRKLTIRTRRMNFPTSDDLHTLSTMIDLNSLGIKWVTSSTSNTHTNSNAHDHTQIVTIEEDEDSGRFPPNLEKLDLQAMPAEQVKNRVLGRIRETSISLRKLSIRGGDINDLGPMEYCFEGVEFVRLRYLEKLSMTWKDFIHSFTNLTRLEMHRCPKLESMSFPCDNNGVFQRAP*

Click here to download the sequence:
Link to NCBI Protein BLAST