Transcript Information: R_Transcript_112627.p1


Annotated TAIR IDAT1G80150.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30148738-30149931 | Forward length=397
E-Value5.6E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8782272698248
Replicate 21.9881023488873
Replicate 33.9676797221973
Condition 2: 8 Hour
Replicate 12.4316216922206
Replicate 22.4788044535264
Replicate 33.9824549859971
Condition 3: 24 Hour
Replicate 14.4537085614946
Replicate 23.1070918991345
Replicate 33.6395259525557


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112627.p1 GENE.R_Transcript_112627~~R_Transcript_112627.p1 ORF type:complete len:433 (+),score=48.82,PPR_2|PF13041.2|0.03,PPR_2|PF13041.2|9.9e-11,PPR_2|PF13041.2|2e-09,PPR_2|PF13041.2|2.7e-09,PPR_2|PF13041.2|0.19,PPR_1|PF12854.3|70,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|0.0081,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.027,PPR_1|PF12854.3|7.7e+02,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|0.073,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.0039,PPR|PF01535.16|8.7e-05,PPR|PF01535.16|3,PPR|PF01535.16|8.3,PPR|PF01535.16|66,PPR|PF01535.16|1.1e+02,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|79,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|46,PPR_3|PF13812.2|4.7e+02 R_Transcript_112627:320-1618(+)
ATGCTTCAAAATATCTCTCGATATCTTCGACCTGTTCGTCGCTTCTCTGTTGCTCTTCACTCCATTTCGCCTTCTTCTTCTATCCCTAATATCGATACTTCGTCTTCAAATAGTTGTTCTAACAACAGAAATGATAGTGGCAATAACAGCAATAGTGATAATAAGGGTTCTTCTTGTAGACGTAATTTGAAACCTAGGGTTAAGTTGGAAGAACCAGCTCTTATTAAGCTAAAGAAGGAAAGAGACCCTGACAGGTTGTTTAGATTATTCAAGGAGAATGCTCTTAACCGTCTCCTTATTGAGAATAAGTTTGTTTTTGAGGATACTATTGCCCGGTTAGCCGGTGCTAAGAGATTTGATTATATAGAGCACTTACTTGAGCATCAGAAATCGTTGCCTCAAGGGCGGAGGGAAGGATTCGTTGTTAGGATTATTATGTTGTACGGTAAAGCTGGTATGGTTGAGCAGGCTGTTAATACTTTCTATAATATGCATTTGTTTGGTTGTAAAAGGACTGTTAAATCATTCAATGCTGCTTTGAAGGTTTTGAGTCAAACTCGGGACTTAGAGTTTATATATTCGTTTTTTGACGAGGTGCCTTGCAAGTTTGGGATCACAGTGGATATGATCTCGGTCAATATTGTGATTAATGTGTTTTGCTGGATGGGGATACTTGATAAGGCTTATTTGGTGTTGGTAAAGATGGAGAAGATGGGGGTAGAGCCTGATGTTGTTAGTTATACAACGCTTATATCGGCGTTTTATAAATGTGGTTGGTGGCAGATTGGGAACGGGTTGTGGAATCGAATGGTTTATAAAGGATGTTATCCGAATGTCGCTACTTTCAATGCGAGGATTCAATTTTTGGTTAGTAGGGGTCGAGCGTGGGAAGCTAATGACCTGTTGCTCTTGATGGAAGATATAGGGATGCAACCAGATGAGGTTACTTATGTTTTGGTTATCAAAGGGTTTGGGCAGGCTGGGATTTTTGACATGACAAAAAGGGTATATTCTGCTTTACATGGACGAGGTTATAAAGCCAACCTTAGGATTTATCAAACTATGGTACATTATTTATGTGAGGCTGGAGATTTTGATTGTGCATATAACAAGTGTAATGGCTGCATGAATAAAAATTGGATGCTTAATGTAGACACCATTTGTACATTGCTTAAAGGTTTGAAGAGCATTGGAAAGCTAGACAAGGCTAAGGTGATTTTAGGCTTGGCTGAAAAAATTCATCCCCCCTTTCCGGCAAGGGAGTTGGATAATTTTAGATCTATATTAGCACGACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112627.p1 GENE.R_Transcript_112627~~R_Transcript_112627.p1 ORF type:complete len:433 (+),score=48.82,PPR_2|PF13041.2|0.03,PPR_2|PF13041.2|9.9e-11,PPR_2|PF13041.2|2e-09,PPR_2|PF13041.2|2.7e-09,PPR_2|PF13041.2|0.19,PPR_1|PF12854.3|70,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|0.0081,PPR_1|PF12854.3|0.00029,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.027,PPR_1|PF12854.3|7.7e+02,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|0.073,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.0039,PPR|PF01535.16|8.7e-05,PPR|PF01535.16|3,PPR|PF01535.16|8.3,PPR|PF01535.16|66,PPR|PF01535.16|1.1e+02,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|79,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|46,PPR_3|PF13812.2|4.7e+02 R_Transcript_112627:320-1618(+)
MLQNISRYLRPVRRFSVALHSISPSSSIPNIDTSSSNSCSNNRNDSGNNSNSDNKGSSCRRNLKPRVKLEEPALIKLKKERDPDRLFRLFKENALNRLLIENKFVFEDTIARLAGAKRFDYIEHLLEHQKSLPQGRREGFVVRIIMLYGKAGMVEQAVNTFYNMHLFGCKRTVKSFNAALKVLSQTRDLEFIYSFFDEVPCKFGITVDMISVNIVINVFCWMGILDKAYLVLVKMEKMGVEPDVVSYTTLISAFYKCGWWQIGNGLWNRMVYKGCYPNVATFNARIQFLVSRGRAWEANDLLLLMEDIGMQPDEVTYVLVIKGFGQAGIFDMTKRVYSALHGRGYKANLRIYQTMVHYLCEAGDFDCAYNKCNGCMNKNWMLNVDTICTLLKGLKSIGKLDKAKVILGLAEKIHPPFPARELDNFRSILARQ*

Click here to download the sequence:
Link to NCBI Protein BLAST