Transcript Information: R_Transcript_112676.p1


Annotated TAIR IDAT3G19440.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6740778-6743132 | Forward length=477
E-Value5E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6457587746058
Replicate 21.9791594654707
Replicate 32.2531217307691
Condition 2: 8 Hour
Replicate 11.0536950079757
Replicate 22.2910739591379
Replicate 32.75249833178
Condition 3: 24 Hour
Replicate 12.0229215385067
Replicate 22.4857361454544
Replicate 32.3322964010628


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112676.p1 GENE.R_Transcript_112676~~R_Transcript_112676.p1 ORF type:complete len:488 (+),score=67.83,PseudoU_synth_2|PF00849.18|3.9e-26 R_Transcript_112676:96-1466(+)
ATGAAAGGAGCTTTTCTTCTCCGGCAACTCCTTAAACCTGCGACAACCGCCGACAAAGTCACAAGAACTCAACAATCTTGTTATGCTACTATCACCGCCATAAAGGAAGAGAATAACCAGTCAAAGAAAAACTACTTTAGTAACAACAACAAAGGCAAATGGGTGATTTTACCACCTTATACCTCAACTATCAACCCAGTTTCACTGGGAAAAAGAATAACTGGTCGGAGTACAACAAAAGAGGAAGGTAATAATGAGTCAGTTGAGACTAATACAATCACAGCTCTCAAATGGGTCCTTCGTTGTTGCCCTCAACTCCCTCGTTCACTTGTCCAAAAGCTCTTTCGCCTTCGACAGGTGGGATCTAAGCACTTAATGAATGAAGGAGATAGAATATTTCTTCCTATAACTGTAAAAGGCTCATCCATCAAGAAGCAAGAGTATGAGTGCAGTCAAGAAGAAATGAACTTTATTCGTGGTCTCGAGTTGTATAAGGATGAGGCTGTTATTGCCATCAATAAACCGCCGAAATTGCCAGTACAGGGCGGGCATGGAATCCTAAAGAGTTTAGATGAACTGGCTGCTACTTGTCTTAGATACGAATACGAGGATCCTCCTCGTCTGGTCCATAGACTTGACAGGGATAGTAGTGGAATATTGGTGATGGGAAGAACACAAGCAAGCACAGCTGTCCTTCATTCTGTTTTCCGTGAAAAAACTGTCAGTACATTGGACAATAAGGAGATTGACTGGGGGAAGAGAACACTACAGAAGAGATATTTGGCACTTGTTTTTGGAGTTCCTAAAAAGCTGAAGGGATTGATCTCAGCTCCGCTTGCTAAGGTTGTGGTTGATGACGGAAAGTCTGAAAGAATTACAGTTATGGACAATGCTTCGTCTTCGCAGCATGCTGTGACAGAATTCCAAGTCATTGAGACCTCTACTTATGGGTATTCTTGGTTACAGCTCTCGCCGCTTACTGGTAGGAAACACCAGCTTCGTGTACACTGTGCAGAGGTGCTCAGAACACCTATTGTGGGGGACTACAAATATGGGTGGCAAGCTCATCGGAAATGGGAACCTTTGCCACATATGAACTTGAATCCCGATGATAAATTTGAGGAATCAAAATCGAATCACCTTGGCCTCGATTTGAAGTGTGGAAGCATTGCCGAGAAGCAACCCCATTTACATCTACATTGCAAGCAGATGATATTACCCAACATTTCTCAAGCTCTTAAGCATGCATCCCCGAATTCAGATTACGACTTTTCCAAGCTGGAAAGCCTTAACTTGGTTGCTCCCTTGCCGTGGCACATGCAAAGGAGTTGGAACCTTCTCAAGGCTCTTGCCAAGCAAGCTCCACTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112676.p1 GENE.R_Transcript_112676~~R_Transcript_112676.p1 ORF type:complete len:488 (+),score=67.83,PseudoU_synth_2|PF00849.18|3.9e-26 R_Transcript_112676:96-1466(+)
MKGAFLLRQLLKPATTADKVTRTQQSCYATITAIKEENNQSKKNYFSNNNKGKWVILPPYTSTINPVSLGKRITGRSTTKEEGNNESVETNTITALKWVLRCCPQLPRSLVQKLFRLRQVGSKHLMNEGDRIFLPITVKGSSIKKQEYECSQEEMNFIRGLELYKDEAVIAINKPPKLPVQGGHGILKSLDELAATCLRYEYEDPPRLVHRLDRDSSGILVMGRTQASTAVLHSVFREKTVSTLDNKEIDWGKRTLQKRYLALVFGVPKKLKGLISAPLAKVVVDDGKSERITVMDNASSSQHAVTEFQVIETSTYGYSWLQLSPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQAHRKWEPLPHMNLNPDDKFEESKSNHLGLDLKCGSIAEKQPHLHLHCKQMILPNISQALKHASPNSDYDFSKLESLNLVAPLPWHMQRSWNLLKALAKQAPL*

Click here to download the sequence:
Link to NCBI Protein BLAST