Transcript Information: R_Transcript_11273.p1


Annotated TAIR IDAT5G60410.2
Annotated Gene NameDNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
Annotated Gene Symbol(s)ATSIZ1, SIZ1
Annotation TypeOrtholog
Chromosome Positionchr5:24295226-24300792 | Forward length=885
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.76017177853
Replicate 28.1652279396715
Replicate 310.631483537103
Condition 2: 8 Hour
Replicate 17.6518327960141
Replicate 29.2652727999357
Replicate 313.340593453641
Condition 3: 24 Hour
Replicate 110.62861445727
Replicate 27.1985914434523
Replicate 39.4745388343745


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11273.p1 GENE.R_Transcript_11273~~R_Transcript_11273.p1 ORF type:complete len:864 (+),score=207.91,zf-MIZ|PF02891.16|1.9e-18,SAP|PF02037.23|5.4e-08,PHD|PF00628.25|3.1e-05,PHD|PF00628.25|0.82 R_Transcript_11273:298-2889(+)
ATGGATTTGGTATCTAGTTGTAAGGACAAATTGCAATATTTTAGGATCAAGGAGCTCAAAGATGTGCTTACTCAACTTGGTCTCTCAAAGCAAGGGAAGAAACAGGATCTTGTTGATCGGATATTGGCAATTCTTGCTGATGATCAAGTTTCCAATATGTGGGCCAAGAGACCTGCAATCGCAAGAGAAGAAGCAGCAAGACTAGTGGATGATACTTACAGGAAAATGCAAGTTTCAGGGGCGACTGACTTGGCATCAAAGGTACAAGCTACATCCAGTAGCAGTCCCTTGAAACCTAAAGAGGAAATTGAAGTTGATGATTCTTTCCAGTTGGACATGAAAGTCCGCTGTCCCTGTGGAAATTCGCTGCTTACGGAAACAATGATCAAGTGCGAGGATCCAAGGTGTCAGATATGGCAGCATATTAGCTGTGTTATTATACCGGAGAAGCCTATGGATGGGATTCCACCAGTTCCTTCCCTGTTTTACTGTGAACTTTGCAGACTCAGTCGAGCTGATCCCTTTTGGTCAACAGTGCAACAGCTTGTATTTCCTGTGAAGTTGATTAAAACCAATGTGCCAACTGATGGTACAAACCCAGTGCAAGCGGTGGAGAAGACATTTCACCTGACAAGGTCAGACAGAGAGTTGTTGTCAAAGCCTGAGTATGCAGTTCAGGTTTGGTGTATGCTTCTTAATGATAAGGTTCCTTTTAGGATGCAGTGGCCACAGTATGCTGATCTGCAGGTCAATGGTATGCCAGTTCGAGCAATTAATAGACCTGGCTCACAATTGCTGGGGGCCAATGGTCGTGATGATGGTCCAAATATCTCACAATGCACCAGAGATGGAATTAACAAGATCTCTATGACAGGATGTGATGCTCGCATTTTCTGCATCGGTGTTAGATTAGTTAAAAGGCGTTCTCTTCAACAGATTATGAACATGATCCCAAGGGAACTAGATGGTGAGCGTTTTGAGGATGCTCTTGCTCGTGTTCGTCGTTGTGTTGGTGGAGGGGGTGCGGCTGAGAATGCTGACAGTGACAGTGACTTGGAAGTGGTTGCAGACTCTTTTACGATTAACTTGCGTTGTCCTATGAGTGGTTCAAGGATGCAGATGGCTGGTAGATTCAAACCCTGTGTCCATATGGGATGTTTTGACCTTGAAACTTTTGTAGAGATGCAACAACGTTCAAGAAAGTGGCAGTGCCCCATATGCCTGAAGAACTATTCCCTGGAACATATAATTATTGACCCTTACTTTAATCGCGTCACAACTACGATGCTATCTTGTGGGGAGGACACAACTGAAATAGAGGTGAAGCCTGATGGTTCTTGGCGTGTTAAGAGCGAAAGTGAACGCTTGGATCTCAGGCAATGGCATTTACCGGACGGAAGGCTTTGTCTTCCTGAGGAGGAAGAGGTCAAACAAACACCTGAAGCATCGAAGCCTGTTAAGAATGAAGGCACTGGTTTGAAACTGGGAATCAAGAAGAACAGCAATGGTTTATGGGAAGTTAGTAAACCTGATGCAAATACTCTCTCTTCAAGTGATAGAGTACCAGAAAAAATCGAAAATGGTGGTCATAGGGTTATTCGCATGAGTAGTAGTGCCACTGGTAGTGGTAGAGATGGTGAAGAAAGTGTTAATCAGGGCGGAAATGGTAATTTTGATTTGTCTCTTAACAATGCAGTAGAGTTTGAATCTATATCTTTAAATCTTGAATCAGCATATGGGGTGAGTCAGAATGCTTCAGCAGCGGTTGCAAGGGATGCAGATGTTATTGTGCTAAGTGACTCGGAGGAAGAAAATGGCATGATATCACCTGGAGCCATCCACCAAAATGGCCCGATGGATAATGGAATTGATTTTGTTGTTGGTCCTCATGGAATGACTACATCATATCCGGGAGACCCTGGTCTTGGAGGAGGTGGAAGTTCATGTCTTGATCTTTTCAACCCTGCTGATGAATTCGGACTGCCACTCTGGCCTTCTACTCAAGCAGGCTCCAGTTTCCAGCTATTTGGTTCTGGTTGTGATGTCTCAGATGCTTTAGCTGATCCTCATCTTAGTTCTGTAAGCTGTCAGACATCGATGAATGGCTATATGTTGGCTCCAGATGCTGCTATAAATCCTGCTTCTTTGGTCCCCGATCATGCAGTTGGTCATTCCAATAATGACCTAAATGATGGTTTGGTAGACAATCCCTTGGCTTTTGGTGCAGAGGATCCATCTCTACAAATTTTTCTTCCTACAAGGCCTTCAGATATATCTGGACAAAATGATACGAGAAATCAGCAGGATATGACCAATGGTTTGCGCAGTGATGATTGGATATCTCTTCGGCTAGGAGATGGTGGTGGGGGTTGTAATGGGGATGCCATTGCTATGAATGGACTGACTTCTGGACAACATCTACATTCTAGGGGAGCCATGGATACACTGGCTGACACAGCTTCTTGCCTTATGGGTTCAAATGGCAGCAGACCTGACAAAACTAGAGAACGGTCAGATAGTCCTTTCTCCTTTGCTCGTCCGAAACGTTCACGGCAACGTTTGTACCTCTCCATCGATTCAGATTCTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11273.p1 GENE.R_Transcript_11273~~R_Transcript_11273.p1 ORF type:complete len:864 (+),score=207.91,zf-MIZ|PF02891.16|1.9e-18,SAP|PF02037.23|5.4e-08,PHD|PF00628.25|3.1e-05,PHD|PF00628.25|0.82 R_Transcript_11273:298-2889(+)
MDLVSSCKDKLQYFRIKELKDVLTQLGLSKQGKKQDLVDRILAILADDQVSNMWAKRPAIAREEAARLVDDTYRKMQVSGATDLASKVQATSSSSPLKPKEEIEVDDSFQLDMKVRCPCGNSLLTETMIKCEDPRCQIWQHISCVIIPEKPMDGIPPVPSLFYCELCRLSRADPFWSTVQQLVFPVKLIKTNVPTDGTNPVQAVEKTFHLTRSDRELLSKPEYAVQVWCMLLNDKVPFRMQWPQYADLQVNGMPVRAINRPGSQLLGANGRDDGPNISQCTRDGINKISMTGCDARIFCIGVRLVKRRSLQQIMNMIPRELDGERFEDALARVRRCVGGGGAAENADSDSDLEVVADSFTINLRCPMSGSRMQMAGRFKPCVHMGCFDLETFVEMQQRSRKWQCPICLKNYSLEHIIIDPYFNRVTTTMLSCGEDTTEIEVKPDGSWRVKSESERLDLRQWHLPDGRLCLPEEEEVKQTPEASKPVKNEGTGLKLGIKKNSNGLWEVSKPDANTLSSSDRVPEKIENGGHRVIRMSSSATGSGRDGEESVNQGGNGNFDLSLNNAVEFESISLNLESAYGVSQNASAAVARDADVIVLSDSEEENGMISPGAIHQNGPMDNGIDFVVGPHGMTTSYPGDPGLGGGGSSCLDLFNPADEFGLPLWPSTQAGSSFQLFGSGCDVSDALADPHLSSVSCQTSMNGYMLAPDAAINPASLVPDHAVGHSNNDLNDGLVDNPLAFGAEDPSLQIFLPTRPSDISGQNDTRNQQDMTNGLRSDDWISLRLGDGGGGCNGDAIAMNGLTSGQHLHSRGAMDTLADTASCLMGSNGSRPDKTRERSDSPFSFARPKRSRQRLYLSIDSDSE*

Click here to download the sequence:
Link to NCBI Protein BLAST