Transcript Information: R_Transcript_112747.p1


Annotated TAIR IDAT3G14880.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to 560 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5006565-5007689 | Forward length=244
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8471838417802
Replicate 21.0631038185467
Replicate 30.57991740749753
Condition 2: 8 Hour
Replicate 11.0331588585336
Replicate 21.6982948233812
Replicate 31.6849596356477
Condition 3: 24 Hour
Replicate 11.8404993136134
Replicate 22.0473236100958
Replicate 30.8311786589961


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112747.p1 GENE.R_Transcript_112747~~R_Transcript_112747.p1 ORF type:3prime_partial len:237 (+),score=23.39,DOG1|PF14144.2|3.8e-26,DOG1|PF14144.2|2.6e+03 R_Transcript_112747:322-1029(+)
ATGACAGCCACCCGGATCTTCGACGGGTCGGATCTTGATGGATCCGAACCCGAATCCTTTGGTGTGTTCTTTGAGGATTGGCTCCAACAGCAAGAGAGGGACCTCCAAAACCTCAAGGCTCATACTGAGTCAACTCAGTCTACTCGGCATATGAACGAGTCGACTCGGGAACTCGTGGGCCGAGTCATGAATCACTACGAGAACTACTACCAAGTCAAGTCCGAGTCAGTGGAGGGTAATGTCCTGGACATGCTGACCCCGGCGTGGCGGTCGACCCTGGAGGATGCCTTCCTATGGATCGGCGGGTGGAGGCCCAGCATGGCCTTCCACCTCCTGTACTCAAAGTCCGGCCTGCAACTCGAGGCTGGACTCGGTGAGTTACTGAGAGGACTCAGCACGGGCGATTTGGGTGACCTCTCACCGAGTCAACTCTCCCGAGTTGACGAGTTGCAGCGGGAAATCGTCAAGGAGGAGAAAGAGTTAAGCGAGACCTTGGCTGCCCATCAAGAGACTGTGGCTGACACATCCATGTTTCAGCTCTCGCACGTTATGACCGAGCTCATGCATGCCCCCAACAGGGTGACTCAGGAGGATCTAGGAGGGACTGAGTCAATGGATGAACGAGTTAAGTCAACTCTGTCCCCTAAAGAAGAAGGTTTAGAAGATATTGTAAAAGAAGCAGATCAATTAAGGCTGAAAACGCTCAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112747.p1 GENE.R_Transcript_112747~~R_Transcript_112747.p1 ORF type:3prime_partial len:237 (+),score=23.39,DOG1|PF14144.2|3.8e-26,DOG1|PF14144.2|2.6e+03 R_Transcript_112747:322-1029(+)
MTATRIFDGSDLDGSEPESFGVFFEDWLQQQERDLQNLKAHTESTQSTRHMNESTRELVGRVMNHYENYYQVKSESVEGNVLDMLTPAWRSTLEDAFLWIGGWRPSMAFHLLYSKSGLQLEAGLGELLRGLSTGDLGDLSPSQLSRVDELQREIVKEEKELSETLAAHQETVADTSMFQLSHVMTELMHAPNRVTQEDLGGTESMDERVKSTLSPKEEGLEDIVKEADQLRLKTLK

Click here to download the sequence:
Link to NCBI Protein BLAST