Transcript Information: R_Transcript_112803.p1


Annotated TAIR IDAT5G23250.1
Annotated Gene NameSuccinyl-CoA ligase, alpha subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7830460-7832491 | Forward length=341
E-Value1.3E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1222.30072388548
Replicate 2181.39325814198
Replicate 3217.24454365383
Condition 2: 8 Hour
Replicate 1175.06316346447
Replicate 2183.47726507812
Replicate 3221.75838664086
Condition 3: 24 Hour
Replicate 1248.29440778819
Replicate 2253.21506908097
Replicate 3237.10610297184


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112803.p1 GENE.R_Transcript_112803~~R_Transcript_112803.p1 ORF type:complete len:341 (+),score=76.41,CoA_binding|PF02629.15|2.9e-31,Ligase_CoA|PF00549.15|1.6e-22,Succ_CoA_lig|PF13607.2|2.5e-09 R_Transcript_112803:232-1254(+)
ATGGCGAGACAAGCCAGTAGACTCGTAGCAAGTATATCATCCAAGATTTGCTCCCTGAAACCCTCCATTTCGCCGGCTATATCATCATCTCCGGCGAGTCAAACCAGGTTCTTTGGTTCTAATCCATCACCAGCGGTTTTCGTCGATAAGAACACTCGAGTCATTTGCCAAGGTATTACCGGAAAGAACGGTACCTTTCACACCGAACAAGCCATCGAATATGGCACCAAAATGGTTGGTGGTGTAACACCAGGGAAGGGTGGCTCTGAGCATTTGGGTCTCCCAGTTTTCAACTCAGTTGCTGAAGCAAAAGCTGAAACAAAGGCCAATGCTTCTGTCATATATGTACCTCCACCTTTTGCTGCTAAAGCAATCATGGAAGGGTTGGAAGCTGAATTGGATCTTATTGTCTGCATCACTGAAGGAATTCCTCAGCATGATATGGTACGTGTGAAAGCTGCCCTTAATAGACAATCAAAAACCAGGCTGATTGGTCCCAATTGCCCTGGCATCATTAAACCCGGAGAGTGCAAGATAGGTATCATGCCTGGCTACATCCACAAACCAGGTCGTATAGGAATTGTTTCCCGTTCTGGAACATTGACATATGAAGCGGTTTTCCAAACAACTGCTGTTGGGCTTGGGCAATCCACCTGTGTCGGTATTGGTGGGGACCCTTTCAATGGGACAAATTTTGTTGATTGCATTGAGAAGTTCATTGCTGACCCACAAACTGAAGGTATCATACTCATTGGTGAAATTGGGGGTACTGCTGAAGAGGATGCTGCTGCTCTGATCAAGGAAAGTGGAACTGATAAGCCAGTTGTTGCTTTCATTGCTGGGCTAACAGCCCCACCTGGTCGACGTATGGGTCATGCTGGAGCCATTGTCTCAGGTGGAAAAGGTACAGCACAAGACAAGATCAAGACTCTGAGAGAAGTTGGGGCAACAGTAGTGGAATCTCCGGCAAAGATCGGCGCTGCCATGCTTGATGTTTTTAAACAGAGGGGTCTGCTAAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112803.p1 GENE.R_Transcript_112803~~R_Transcript_112803.p1 ORF type:complete len:341 (+),score=76.41,CoA_binding|PF02629.15|2.9e-31,Ligase_CoA|PF00549.15|1.6e-22,Succ_CoA_lig|PF13607.2|2.5e-09 R_Transcript_112803:232-1254(+)
MARQASRLVASISSKICSLKPSISPAISSSPASQTRFFGSNPSPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPGKGGSEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAKAIMEGLEAELDLIVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTDKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREVGATVVESPAKIGAAMLDVFKQRGLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST