Transcript Information: R_Transcript_112809.p1


Annotated TAIR IDAT5G42240.1
Annotated Gene Nameserine carboxypeptidase-like 42
Annotated Gene Symbol(s)scpl42
Annotation TypeOrtholog
Chromosome Positionchr5:16888717-16890931 | Forward length=473
E-Value8.7E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0702669318663
Replicate 26.9987668054327
Replicate 35.0903861324783
Condition 2: 8 Hour
Replicate 14.4210589488082
Replicate 29.6276019038438
Replicate 34.9160612096881
Condition 3: 24 Hour
Replicate 16.2177394575032
Replicate 25.054330162424
Replicate 35.1679302732952


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112809.p1 GENE.R_Transcript_112809~~R_Transcript_112809.p1 ORF type:5prime_partial len:144 (+),score=18.17,Peptidase_S10|PF00450.18|4.1e-28 R_Transcript_112809:3-434(+)
CATGCAAATACGACCAATCTCCCATATGAATGGGCTTTGTGTAACGATAACGACATTGTTAAGTACAATGAGTCTGATATGTACTTGGACATGCTTCCCGTGATCAAAAGGATACTTTCACATGGTATTCCTGTTTGGGTTTTCAGCGGAGATCAGGATACTAGTGTACCTTTCATGGGAACACGTACCCTTGTACGTGAGCTTGCTGAGGAACTCAACTTTAAGATGACTGTCCCATATGGAGCTTGGTTTCACAAGAAACAGGTCGCTGGTTGGGCAACTGAATATGGAGGTTTACTGACATTTGCGACTGTGAAGGGTGGTGCACATGAGGTAGCATACTCGCAGCCATCTAGGGCTTTGCATCTTTTTAGTTCTTTTGTTCGAGGGCGAAGATTACCAAGTACAACCAAGTTGCCCGGAGATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112809.p1 GENE.R_Transcript_112809~~R_Transcript_112809.p1 ORF type:5prime_partial len:144 (+),score=18.17,Peptidase_S10|PF00450.18|4.1e-28 R_Transcript_112809:3-434(+)
HANTTNLPYEWALCNDNDIVKYNESDMYLDMLPVIKRILSHGIPVWVFSGDQDTSVPFMGTRTLVRELAEELNFKMTVPYGAWFHKKQVAGWATEYGGLLTFATVKGGAHEVAYSQPSRALHLFSSFVRGRRLPSTTKLPGDN*

Click here to download the sequence:
Link to NCBI Protein BLAST