Transcript Information: R_Transcript_112845.p1


Annotated TAIR IDAT5G54490.1
Annotated Gene Namepinoid-binding protein 1
Annotated Gene Symbol(s)PBP1
Annotation TypeOrtholog
Chromosome Positionchr5:22121458-22121841 | Forward length=127
E-Value1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1470622335722
Replicate 24.1372020524725
Replicate 33.3852321570669
Condition 2: 8 Hour
Replicate 12.171160438672
Replicate 24.5162372191557
Replicate 33.1295880379977
Condition 3: 24 Hour
Replicate 13.0535014539311
Replicate 23.6939842476829
Replicate 32.3720665177918


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112845.p1 GENE.R_Transcript_112845~~R_Transcript_112845.p1 ORF type:5prime_partial len:203 (+),score=34.25,EF-hand_8|PF13833.2|2.1e+03,EF-hand_8|PF13833.2|6.7e-16 R_Transcript_112845:2-610(+)
CAACTTCGAGGAAAGCAACGTTACAAATTAAAGCACAAAAATGCATTAATCGAAACAACACTTGTTTTTAACTTATCTGTACCTTCGTTGGCATTTGATCTCTTTCCTCGAACACTTCCTCTCTTTTCCTTCTTCATCACCCTATATTATTTCTCTCAATCTCTTCCTCTATATATATATTCCTACAAAACTTTAATTATACAAGTGATCATAATATATTCTATTTCATATCTTAGATCATACTCCATTATGGAGGCAAATTACAAGAGTAGAAGCATCAATGGAGTGGTTTTCGAGGATTTCTTTCCAGCAATGGTGGCGAAGCTTGGAGCAGAAGGGTTCATGGAGGAGCTATGCAAAGGTTTTCAGTTGCTAATGGATGAAGAGAAGGGAGTTATAACATTTGAGAGCTTGAAAATGAACTCAAAACTCTTAGGGTTGGGGGATATGAGTGAGGAAGAATTGAAGGGAATGTTGAGAGAAGGAGATGTAGATGGAGATGGGTGTTTGAGCCAAATGGAGTTTTGTGTTTTGATGTTTAGATTGAGCCCTGGCTTGATGGAAGCTTCTAGGATGTGGCTTCAACAAGCTCTTTGTTGTGCTAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112845.p1 GENE.R_Transcript_112845~~R_Transcript_112845.p1 ORF type:5prime_partial len:203 (+),score=34.25,EF-hand_8|PF13833.2|2.1e+03,EF-hand_8|PF13833.2|6.7e-16 R_Transcript_112845:2-610(+)
QLRGKQRYKLKHKNALIETTLVFNLSVPSLAFDLFPRTLPLFSFFITLYYFSQSLPLYIYSYKTLIIQVIIIYSISYLRSYSIMEANYKSRSINGVVFEDFFPAMVAKLGAEGFMEELCKGFQLLMDEEKGVITFESLKMNSKLLGLGDMSEEELKGMLREGDVDGDGCLSQMEFCVLMFRLSPGLMEASRMWLQQALCCAN*

Click here to download the sequence:
Link to NCBI Protein BLAST