Transcript Information: R_Transcript_112849.p1


Annotated TAIR IDAT5G54490.1
Annotated Gene Namepinoid-binding protein 1
Annotated Gene Symbol(s)PBP1
Annotation TypeHomolog
Chromosome Positionchr5:22121458-22121841 | Forward length=127
E-Value1E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65974557667658
Replicate 20.25296747489516
Replicate 30
Condition 2: 8 Hour
Replicate 10.88503126315344
Replicate 20.26940821495404
Replicate 31.3121646231605
Condition 3: 24 Hour
Replicate 10
Replicate 20.79717803218954
Replicate 30.52741457076861


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112849.p1 GENE.R_Transcript_112849~~R_Transcript_112849.p1 ORF type:3prime_partial len:83 (-),score=27.72,EF-hand_8|PF13833.2|3.8e+02,EF-hand_8|PF13833.2|1.4e-08 R_Transcript_112849:3-248(-)
ATGGCAAACAAGAGTACTAGAAAGAACAATGGGGCCGTTTTCGAAGATTTCTTCCCAGCAATGGTGGCCAAGCTTGGAGCAGAAGGGTTCATGGAGGAGCTATGCAAAGGGTTTCAGTTGCTAATGGATGAAGAGAAGGGAGTTATAACGTTTGAGAGCTTGAAAAGGAACTCAAAACACTTAGGGTTGGGGGATATGAGTGAGGAAGAATTGAAGGAAATGTTGAGAGAGGGAGATGTAGATGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112849.p1 GENE.R_Transcript_112849~~R_Transcript_112849.p1 ORF type:3prime_partial len:83 (-),score=27.72,EF-hand_8|PF13833.2|3.8e+02,EF-hand_8|PF13833.2|1.4e-08 R_Transcript_112849:3-248(-)
MANKSTRKNNGAVFEDFFPAMVAKLGAEGFMEELCKGFQLLMDEEKGVITFESLKRNSKHLGLGDMSEEELKEMLREGDVDG

Click here to download the sequence:
Link to NCBI Protein BLAST