Transcript Information: R_Transcript_112861.p1


Annotated TAIR IDAT3G63140.1
Annotated Gene Namechloroplast stem-loop binding protein of 41 kDa
Annotated Gene Symbol(s)CSP41A
Annotation TypeOrtholog
Chromosome Positionchr3:23327006-23328620 | Reverse length=406
E-Value4.3E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.053549600342
Replicate 23.2703041280464
Replicate 34.4469061699077
Condition 2: 8 Hour
Replicate 13.0952786389294
Replicate 21.5647569685706
Replicate 32.2945602590105
Condition 3: 24 Hour
Replicate 13.8349384533862
Replicate 22.2901623227236
Replicate 32.5198034741123


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_112861.p1 GENE.R_Transcript_112861~~R_Transcript_112861.p1 ORF type:complete len:443 (+),score=115.48,Epimerase|PF01370.17|7.1,Epimerase|PF01370.17|2.9e-06 R_Transcript_112861:101-1330(+)
ATGGCAACTCTTGTTGCAGCATTATCATCTTCCCTCATTTCTTCTTCAATCAACTCAATCTCTATCAACAACACTTCCCCTTCATTCCCACCATTGTCATCCTCATCTTCGAGCTTCGCTTCCTCGAGCTCTTCCTTCTTATCTCCTCTGAATCCCTTACAACTGTCTAACCGCGCTTCTGTTTTCCCTTTGAGCAGCAGGAACAACAGCACTTGCAACTTCAGTATCAATGCAAGTGGTGCAGATAAGAAGAAGGTGCTCATTGTTAACACTAACAGTGGAGGGCATGCTGTGATTGGTTTCTACTTTGCAAAAGAGCTTTTGGGTTCTGGTCATCAGGTTACTATCTTCACTGTTGGGGATGAGAGTTCTGACAAGATGAAGAAACCCCCTTTTAACAGATTCAATGAAATTGTGAGTGCTGGTGGCAAGACAGTATGGGGAAATCCTGCAGAAATAGGATCAGTAGTTGGAGGAGAAGCATTTGATGTTGTGCTGGACAACAATGGCAAGGATCTTGAAGCTGTCAAGCCTGTGATAGATTGGGCAAAGAGCTCCGGTGTGGGACAATTTCTGTTCATCAGCAGTGCAGGAATCTATAAGCCTACTGATGAACCACCTCATGTTGAAGGAGATGTTGTTAAAGCTGATGCTTCTCATGTTGGAGTAGAAGAATACATGGCCGAGACTTTCAGTAGCTGGGCAATCTTCCGCCCTCAGTATATGATTGGTTCAGGAAACAACAAAGACTGTGAAGAATGGTTCTTTGACAGAATTGTTCGAGACAGGCCAGTTCCTATCCCTGGCTCCGGAATGCAGCTCACAAACATCAGTCATGTAAGGGACTTGTCATCCATGCTTACAGCAGCAGTCGAGAACCCAACCGCAGCAAGTGGAAACATCTTCAACTGTGTCACTGACCGAGCTGTGACCCTCGATGGAATGGCCAAGCTCTGTGCTCAAGCTGCTGGTCGCCCAGTCAAGATCGTGCACTATGAGCCAAAGGCTGTTGGTGTTGACGCAAAGAAGGCTTTTCCTTTCCGCAACATGCACTTTTACGCAGAGCCACGAGCAGCTAAGGAGCTTCTAGGATGGCAAGCTACCACAAACCTTCCTGAAGACCTGAAGGAGAGATATGAGGAGTACGTAAAGATTGGAAGAGACAAAAAGGATATAAAGTTTGAACTAGATGATAAGGTACTAGAAGCACTCAAGGTGCCAGTGGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_112861.p1 GENE.R_Transcript_112861~~R_Transcript_112861.p1 ORF type:complete len:443 (+),score=115.48,Epimerase|PF01370.17|7.1,Epimerase|PF01370.17|2.9e-06 R_Transcript_112861:101-1330(+)
MATLVAALSSSLISSSINSISINNTSPSFPPLSSSSSSFASSSSSFLSPLNPLQLSNRASVFPLSSRNNSTCNFSINASGADKKKVLIVNTNSGGHAVIGFYFAKELLGSGHQVTIFTVGDESSDKMKKPPFNRFNEIVSAGGKTVWGNPAEIGSVVGGEAFDVVLDNNGKDLEAVKPVIDWAKSSGVGQFLFISSAGIYKPTDEPPHVEGDVVKADASHVGVEEYMAETFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNISHVRDLSSMLTAAVENPTAASGNIFNCVTDRAVTLDGMAKLCAQAAGRPVKIVHYEPKAVGVDAKKAFPFRNMHFYAEPRAAKELLGWQATTNLPEDLKERYEEYVKIGRDKKDIKFELDDKVLEALKVPVA*

Click here to download the sequence:
Link to NCBI Protein BLAST