Transcript Information: R_Transcript_113107.p1


Annotated TAIR IDAT3G48380.3
Annotated Gene NamePeptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17916468-17920099 | Forward length=653
E-Value2.8E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7502839271648
Replicate 20.86286166094376
Replicate 32.3534319448102
Condition 2: 8 Hour
Replicate 11.341691229986
Replicate 21.3784105244567
Replicate 31.2432610013964
Condition 3: 24 Hour
Replicate 10.78622627492137
Replicate 21.5106341705875
Replicate 30.74957892763347


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113107.p1 GENE.R_Transcript_113107~~R_Transcript_113107.p1 ORF type:internal len:146 (-),score=13.55,Peptidase_C78|PF07910.9|8e-38 R_Transcript_113107:1-435(-)
GGAGTATCAGGAGGTCTTGTATCTGTGGTTCAAGGCTCTTATGAATACCACCATTATCTTCAGGATGGTTTTGATGATTCGGGGTGGGGATGTGCTTACCGCTCTTTACAAACTATTATCTCCTGGTTTAGACTTCAACACTATACTTCAATTGATGTTCCAACACACAGGGAGATACAACAGGCACTTGTAGAGATCGGTGATAAAGATCCATCTTTCATTGGATCTCGTGAGTGGATTGGTGCCATTGAGTTAAGCTATGTTTTGGACAAACTTTTGGGCGTTACCTGCAAGGTTATCAACGTAAGATCTGGATCTGAGCTTCCCGAAAAATGTCGAGAGTTGGCCTTGCATTTCGAGCAGCAAGGAACGCCCATCATGATTAGTAAATTTTTAGCCTACATTGATGACACTTTTTACCTTCTGTGTTTGCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113107.p1 GENE.R_Transcript_113107~~R_Transcript_113107.p1 ORF type:internal len:146 (-),score=13.55,Peptidase_C78|PF07910.9|8e-38 R_Transcript_113107:1-435(-)
GVSGGLVSVVQGSYEYHHYLQDGFDDSGWGCAYRSLQTIISWFRLQHYTSIDVPTHREIQQALVEIGDKDPSFIGSREWIGAIELSYVLDKLLGVTCKVINVRSGSELPEKCRELALHFEQQGTPIMISKFLAYIDDTFYLLCLL

Click here to download the sequence:
Link to NCBI Protein BLAST