Transcript Information: R_Transcript_113166.p1


Annotated TAIR IDAT1G26500.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9158380-9159897 | Forward length=505
E-Value4.1E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4857061242213
Replicate 21.7903822060409
Replicate 31.7313231904069
Condition 2: 8 Hour
Replicate 11.4710500259004
Replicate 21.1700461428527
Replicate 31.8292320780235
Condition 3: 24 Hour
Replicate 11.5572156065303
Replicate 21.3677679932141
Replicate 32.4178278433201


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113166.p1 GENE.R_Transcript_113166~~R_Transcript_113166.p1 ORF type:complete len:516 (+),score=83.13,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|0.0005,PPR_2|PF13041.2|4.7e-05,PPR_2|PF13041.2|0.0093,PPR_2|PF13041.2|6e-11,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|51,PPR|PF01535.16|1.6,PPR|PF01535.16|36,PPR|PF01535.16|61,PPR|PF01535.16|0.00079,PPR|PF01535.16|0.053,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|9.8e-07,PPR|PF01535.16|22,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|19,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|5.5e+02,PPR_1|PF12854.3|3.9e+03,PPR_3|PF13812.2|0.0078,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.00096,PPR_3|PF13812.2|1.2e+03 R_Transcript_113166:289-1836(+)
ATGAATTTGAGAAGTATCACAATCTCAAGGCGAATAATTAACCTCTGCACCCACCACCACACGCTACGACCCTTAACCACCAACCCCATACACACAACTCTGCCTCAACCCATCGATCCCACACCAAATCGACCATTTGCCCCAGTCAACCCAGCACATCTTCTGCGAGTCTGCACAACCCTCTTTCAACAACAGAACTCACCTGATTCCAGGCTCCAAAGCAATCTTCAGAAAACTGAATTCAGTCTTAACCATGAGTTTTTCCTTCAGGTATGCAACAAATTTCCCCTCTCATGGCGACCTGTGTACTGCTTTTACAAGTTCACGTTGACGCAGCCCAGATTCACTCACACCCCTGTCACATTTAATAAGATGCTTGATGTGATTGGTAAGTCTAGGAATATTGATCTCTTCTGGGAAGTACTACATGAAATGGCACAGAAAAAAGTTGCAAGTGAGAAGACATTTAGGATTGCATTGAAAACATTGGCTGATGCTAGGGAATTGAAGAAATGTGTCGAATATTTTCACTTAATGAATTCTCATGGGTATGGCTATAGTTTAGATACTTTGAATAAAGTTGTTGAGACCCTCTGTAAGGAAAAGCTTGTTGATGAGGCTAGGCATGTTGTGTTAAAATTGAAGGATTGGATTAAGCCCGATGGAATTACTTATAAGCTCTTAATATGTGGTTTTTGTGATGTGGGAGATGTGATTGAAGCTTCAAGAACATGGAATATGATGATGGATGAAGGATTTGAAGCTGATATTGATTCTGTAAATACAATGATGGAGAGGTTTTTCAAGGATAATCAATTTCGTGAAGGAGTGAAGCTCTTTCAAACAATGAGGGTAAAGAGGATGGAGGAATTAGGACTTCCCACATATAAGATTGTGATAAAATGGATGTGTAAAAGTGGTAAGCTTTCTCAAGCTCATATGGTGTTCGATGAAATGAAAAGGAGAGGAATCCAAGTTGATAATACAACCTTGGGGTCAATAATATATGGGCTTGTGTCTAAGAATCGAGTTCGAGAGGCTTATTTGATGGTGGGAAATATTGCGAAGCCTGATATAATTGTGTACCATGCTTTGATCAGAGGATTGCTAAAACTGAGGAAGGCAGATGAGGCAACAGAAGTTTTTAGAGAGATGATAAGAAAGGGTTGCGAACCTATAATGCATACCTATATCATGTTACTGCAAGGGCATCTGGGGAAGAGGGGAAGGAAGGGGAGTGATCCCCTTGTAAATTTTGACAGCATATTTGTTGGGGGTCTGGTTAAAGCTGGAAGATTTCTGGAAGCCAACAAGTATGTTGAGAGGACGACGAAAAGAGGTCTCGAGGTGCCAAGGTTTGATTATAACAAATTCTTGCATTACTTCTCAAATGAGGAAGGTGCAGCTATGTTTGAGGCGTTTGGGCAAAAGTTAAGAGAGGTGGGATTATTTGATTTAGCAGACATATTTGTGAGATATGGGGAGAAAATGGCTACTAGAGATAGAAGAAGAACTAGAGAAGCACCTAATGAGCTTCCAATGACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113166.p1 GENE.R_Transcript_113166~~R_Transcript_113166.p1 ORF type:complete len:516 (+),score=83.13,PPR_2|PF13041.2|0.0039,PPR_2|PF13041.2|0.0005,PPR_2|PF13041.2|4.7e-05,PPR_2|PF13041.2|0.0093,PPR_2|PF13041.2|6e-11,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|51,PPR|PF01535.16|1.6,PPR|PF01535.16|36,PPR|PF01535.16|61,PPR|PF01535.16|0.00079,PPR|PF01535.16|0.053,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|9.8e-07,PPR|PF01535.16|22,PPR_1|PF12854.3|2.1e+03,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|19,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|5.5e+02,PPR_1|PF12854.3|3.9e+03,PPR_3|PF13812.2|0.0078,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.00096,PPR_3|PF13812.2|1.2e+03 R_Transcript_113166:289-1836(+)
MNLRSITISRRIINLCTHHHTLRPLTTNPIHTTLPQPIDPTPNRPFAPVNPAHLLRVCTTLFQQQNSPDSRLQSNLQKTEFSLNHEFFLQVCNKFPLSWRPVYCFYKFTLTQPRFTHTPVTFNKMLDVIGKSRNIDLFWEVLHEMAQKKVASEKTFRIALKTLADARELKKCVEYFHLMNSHGYGYSLDTLNKVVETLCKEKLVDEARHVVLKLKDWIKPDGITYKLLICGFCDVGDVIEASRTWNMMMDEGFEADIDSVNTMMERFFKDNQFREGVKLFQTMRVKRMEELGLPTYKIVIKWMCKSGKLSQAHMVFDEMKRRGIQVDNTTLGSIIYGLVSKNRVREAYLMVGNIAKPDIIVYHALIRGLLKLRKADEATEVFREMIRKGCEPIMHTYIMLLQGHLGKRGRKGSDPLVNFDSIFVGGLVKAGRFLEANKYVERTTKRGLEVPRFDYNKFLHYFSNEEGAAMFEAFGQKLREVGLFDLADIFVRYGEKMATRDRRRTREAPNELPMT*

Click here to download the sequence:
Link to NCBI Protein BLAST