Transcript Information: R_Transcript_113171.p1


Annotated TAIR IDAT1G26500.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9158380-9159897 | Forward length=505
E-Value1.5E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1284371431298
Replicate 21.7806049823009
Replicate 32.1045059275617
Condition 2: 8 Hour
Replicate 11.4708823466543
Replicate 21.5802743350661
Replicate 32.2448988399772
Condition 3: 24 Hour
Replicate 11.7847058622243
Replicate 21.7145430939671
Replicate 31.6241759661655


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113171.p1 GENE.R_Transcript_113171~~R_Transcript_113171.p1 ORF type:complete len:283 (+),score=31.90,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|8.1e+02,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|0.00029,PPR|PF01535.16|0.74,PPR|PF01535.16|17,PPR|PF01535.16|29,PPR|PF01535.16|0.00036,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|0.92,PPR_1|PF12854.3|4.9e-05,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|1.1 R_Transcript_113171:68-916(+)
ATGAATTTGAGAAGTATCACAATCTCAAGGCGAATAATTAACCTCTGCACCCACCACCACACGCTACGACCCTTAACCACCAACCCCATACACACAACTCTGCCTCAACCCATCGATCCCACACCAAATCGACCATTTGCCCCAGTCAACCCAGCACATCTTCTGCGAGTCTGCACAACCCTCTTTCAACAACAGAACTCACCTGATTCCAGGCTCCAAAGCAATCTTCAGAAAACTGAATTCAGTCTTAACCATGAGTTTTTCCTTCAGGTATGCAACAAATTTCCCCTCTCATGGCGACCTGTGTACTGCTTTTACAAGTTCACGTTGACGCAGCCCAGATTCACTCACACCCCTGTCACATTTAATAAGATGCTTGATGTGATTGGTAAGTCTAGGAATATTGATCTCTTCTGGGAAGTACTACATGAAATGGCACAGAAAAAAGTTGCAAGTGAGAAGACATTTAGGATTGCATTGAAAACATTGGCTGATGCTAGGGAATTGAAGAAATGTGTCGAATATTTTCACTTAATGAATTCTCATGGGTATGGCTATAGTTTAGATACTTTGAATAAAGTTGTTGAGACCCTCTGTAAGGAAAAGCTTGTTGATGAGGCTAGGCATGTTGTGTTAAAATTGAAGGATTGGATTAAGCCCGATGGAATTACTTATAAGCTCTTAATATGTGGTTTTTGTGATGTGGGAGATGTGATTGAAGCTTCAAGAACATGGAATATGATGATGGATGAAGGATTTGAAGCTGATATTGATGCTGTAAATATATGTCCATTTTCAATGGGGCCAAATATTTTACTATATTTTTGGTCTTGGAATAATATGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113171.p1 GENE.R_Transcript_113171~~R_Transcript_113171.p1 ORF type:complete len:283 (+),score=31.90,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|8.1e+02,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|0.00029,PPR|PF01535.16|0.74,PPR|PF01535.16|17,PPR|PF01535.16|29,PPR|PF01535.16|0.00036,PPR_1|PF12854.3|9.8e+02,PPR_1|PF12854.3|0.92,PPR_1|PF12854.3|4.9e-05,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|7e+02,PPR_3|PF13812.2|1.1 R_Transcript_113171:68-916(+)
MNLRSITISRRIINLCTHHHTLRPLTTNPIHTTLPQPIDPTPNRPFAPVNPAHLLRVCTTLFQQQNSPDSRLQSNLQKTEFSLNHEFFLQVCNKFPLSWRPVYCFYKFTLTQPRFTHTPVTFNKMLDVIGKSRNIDLFWEVLHEMAQKKVASEKTFRIALKTLADARELKKCVEYFHLMNSHGYGYSLDTLNKVVETLCKEKLVDEARHVVLKLKDWIKPDGITYKLLICGFCDVGDVIEASRTWNMMMDEGFEADIDAVNICPFSMGPNILLYFWSWNNMD*

Click here to download the sequence:
Link to NCBI Protein BLAST