Transcript Information: R_Transcript_113193.p1


Annotated TAIR IDAT5G03450.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:858954-862238 | Reverse length=630
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8230978244877
Replicate 22.5206286578953
Replicate 32.2526421390852
Condition 2: 8 Hour
Replicate 11.094515035956
Replicate 21.7420354946518
Replicate 34.0568733825897
Condition 3: 24 Hour
Replicate 12.2869846280472
Replicate 21.999902147166
Replicate 31.7051723957864


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113193.p1 GENE.R_Transcript_113193~~R_Transcript_113193.p1 ORF type:complete len:783 (+),score=174.62,zf-RING_2|PF13639.2|1.7e-08,zf-C3HC4_2|PF13923.2|7.1e-06,zf-RING_UBOX|PF13445.2|1.2e-05,zf-C3HC4|PF00097.21|1.5e-05 R_Transcript_113193:132-2480(+)
ATGGACTATGACCATGATTCCGACAACTACGACCAAGACGACGACTATGTGGGTTACTACCATGACCAACAAGAAGAAGAAGACAACTGCTTCTACGACAACGACAACGTCGCATACGGCGCCAATTACTACGACAATGGCAGTGACTCGTCGTCTCATGCGGAGCCCTTCACCGGCGCCGGTGCCGGAGACTTCGGGTTTTGGGGCGAATTTTTGGCCGGATCTGAAGGCAAAGGCGAAGAGGATTACGATTGTGATGATCATGATAGAGAGGACGACCATCATTGCCTTTGGGGAGACGTTGAGGTTGAACCTGACAACTATCATGATGACAACGACGATGATGATGATGAATTTGGGGAAGAATGGGAGGTCAGAATCGAAGATAGTGATGGTGATGGTGATTTTAGAGGTGGTGATTTAGTGATTGAATATGAAGATGAAGTTCAAAATGAAGTTGAAGTTGAACATGAGGATGATGAGGATGAGGATGAATATGTAGAAGAGGAGGTTGAATTGGACCATCATGTGTACAGTAATGTTGCTTCAGTTGGAAATATTCTATCATCATCTTTAATGTACAGAGTGCCAGTTCAGTTTCCGCAGGATGATGATGATCATGTTATGGGGTACTGGTGGAATCGGGATAGTGGTATTAATGATAATAGGAGCGAAGAAACGAGAGGTGAGATTAAGCAAGAAGGGATCAAAAGGAGAGAGATTAACGAGACGAGGCTTTACTGGAGTGGTAGCCAAGAGCAGAGGAGAGATATCAGAGGAGGTGGTGGAGGTGGAAAATTTGAAAGGAGGGGAGAAATTAACAACTTGACCATGCCATTGGGTAGTTTGAATGCTAGTAGTAGTAGTAGCCAAGAGCAAAGGAGAGAGATAAACAAGGAAATATGGTCGAGAGGAGAGACCACTAGCACTGTGCCACTGCCATCAAGCTACTTGCAGGTCCCAAGGCCTAATTACTGGGATGTTAGTAGTAGTGGTAGTAGAAGAAGAAGAAACCAAGAGCAGGAAAGAGTGGTTGACAATGGAAGGCGAGAGATTAACCCATCTTCAAGGGATTCGCAGGCAAGAAGGCCTAATTACTGGAATGGTAGTAATAGTAATATTAATAGCCTAGAGCAAAGGAGAGAGATTAACCAGGAAAGACGGCCGAGTGTAGAGACCACTTGCACTGTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATGGTATTAATAGCAGTAAACAAGTGCAAAGGAGAGAGATTGACCAGGAAAGACGGTCGAGTGTAGAGATCACTGGCACTTTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATGGTATTAATAGCAGTAAACAAGTGCAAAGGAGAGAGATTGACCAGGAAAGACGGTCGAGTGTAGAGATCACTGGCACTTTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATCGTAGTAATCGCAGTAGGCAAGGGCAAAGGAGAGAGATTGTGCAGGAAAGACGGCCGAGTGTAGAAACCACTGGCACTGTGCCATTAAACCATTCGCAGGTCTCAAGGCCTGGTTACTGGAATGGTAGTAATAGTAGTAGCCAAGAGCAAAGGAGAGAGATTGACCAGGAAAGACGGCCGACAGACACTGGCATTGTGCCTAGTTACTGGAATTCGCAAGAGCTGAAAAGAGATGAGAACAGGAGGTTACAAGAGAGGGGAGACATTAACCAGGCAGCGAGGGAACCGAGAAGCCAGAGCCAGGCTAGGCCATTGCCTACTTATTGGGAGGGCAGTAGTAGTAGTAGTAATCAATTGGTGAAGTATAGGGGGAAAAAGGGTGATCAGAGTGATGGGGTTAGTAGTAAAGTGAGGGATGGGAATAGGGTAAGTGAGTTGCAGAACAAGGAAGATAAGGAAAGAGTATTAACAAATGGAAGTGGTACTGGTAGGAAGTTGAAAGGGAATGAGATGGATGGTGGTGCTGCTGCATGCCCTATTTGCTTGGAGCCTTGGACTAGCGACGGGGACCACTCAGTTTGTTGCCTACCTTGCGGCCACCTATATGGTATGTCTTGCATCAAGAATTGGCTTGAGCAGGCAAATTCAAGGAAGTGCCCACAATGCAATGAGGCTTGCAATTTAGAAGAAGTCAGGAGAGTATATGGATTAAGTATTGGAGCCAAGGACAAAGAGTTACAAGAGAAAATCAAGTTACTTGAGGCTAAATGTGCTTCTCTGGAGCTGAAGGATAATGATTGGCAGAAGAAGGAAGCTGAGTGGCGCCAAAGAGAAGTCCATTTGCGCCTGCAACAGTACAAAGGCAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113193.p1 GENE.R_Transcript_113193~~R_Transcript_113193.p1 ORF type:complete len:783 (+),score=174.62,zf-RING_2|PF13639.2|1.7e-08,zf-C3HC4_2|PF13923.2|7.1e-06,zf-RING_UBOX|PF13445.2|1.2e-05,zf-C3HC4|PF00097.21|1.5e-05 R_Transcript_113193:132-2480(+)
MDYDHDSDNYDQDDDYVGYYHDQQEEEDNCFYDNDNVAYGANYYDNGSDSSSHAEPFTGAGAGDFGFWGEFLAGSEGKGEEDYDCDDHDREDDHHCLWGDVEVEPDNYHDDNDDDDDEFGEEWEVRIEDSDGDGDFRGGDLVIEYEDEVQNEVEVEHEDDEDEDEYVEEEVELDHHVYSNVASVGNILSSSLMYRVPVQFPQDDDDHVMGYWWNRDSGINDNRSEETRGEIKQEGIKRREINETRLYWSGSQEQRRDIRGGGGGGKFERRGEINNLTMPLGSLNASSSSSQEQRREINKEIWSRGETTSTVPLPSSYLQVPRPNYWDVSSSGSRRRRNQEQERVVDNGRREINPSSRDSQARRPNYWNGSNSNINSLEQRREINQERRPSVETTCTVPSNYSQVSRPSYWNGINSSKQVQRREIDQERRSSVEITGTLPSNYSQVSRPSYWNGINSSKQVQRREIDQERRSSVEITGTLPSNYSQVSRPSYWNRSNRSRQGQRREIVQERRPSVETTGTVPLNHSQVSRPGYWNGSNSSSQEQRREIDQERRPTDTGIVPSYWNSQELKRDENRRLQERGDINQAAREPRSQSQARPLPTYWEGSSSSSNQLVKYRGKKGDQSDGVSSKVRDGNRVSELQNKEDKERVLTNGSGTGRKLKGNEMDGGAAACPICLEPWTSDGDHSVCCLPCGHLYGMSCIKNWLEQANSRKCPQCNEACNLEEVRRVYGLSIGAKDKELQEKIKLLEAKCASLELKDNDWQKKEAEWRQREVHLRLQQYKGS*

Click here to download the sequence:
Link to NCBI Protein BLAST