Transcript Information: R_Transcript_113196.p1


Annotated TAIR IDAT5G03450.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:858954-862238 | Reverse length=630
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.39651576597933
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113196.p1 GENE.R_Transcript_113196~~R_Transcript_113196.p1 ORF type:complete len:824 (+),score=181.37,zf-RING_2|PF13639.2|1.8e-08,zf-C3HC4_2|PF13923.2|7.6e-06,zf-RING_UBOX|PF13445.2|1.3e-05,zf-C3HC4|PF00097.21|1.6e-05 R_Transcript_113196:132-2603(+)
ATGGACTATGACCATGATTCCGACAACTACGACCAAGACGACGACTATGTGGGTTACTACCATGACCAACAAGAAGAAGAAGACAACTGCTTCTACGACAACGACAACGTCGCATACGGCGCCAATTACTACGACAATGGCAGTGACTCGTCGTCTCATGCGGAGCCCTTCACCGGCGCCGGTGCCGGAGACTTCGGGTTTTGGGGCGAATTTTTGGCCGGATCTGAAGGCAAAGGCGAAGAGGATTACGATTGTGATGATCATGATAGAGAGGACGACCATCATTGCCTTTGGGGAGACGTTGAGGTTGAACCTGACAACTATCATGATGACAACGACGATGATGATGATGAATTTGGGGAAGAATGGGAGGTCAGAATCGAAGATAGTGATGGTGATGGTGATTTTAGAGGTGGTGATTTAGTGATTGAATATGAAGATGAAGTTCAAAATGAAGTTGAAGTTGAACATGAGGATGATGAGGATGAGGATGAATATGTAGAAGAGGAGGTTGAATTGGACCATCATGTGTACAGTAATGTTGCTTCAGTTGGAAATATTCTATCATCATCTTTAATGTACAGAGTGCCAGTTCAGTTTCCGCAGGATGATGATGATCATGTTATGGGGTACTGGTGGAATCGGGATAGTGGTATTAATGATAATAGGAGCGAAGAAACGAGAGGTGAGATTAAGCAAGAAGGGATCAAAAGGAGAGAGATTAACGAGACGAGGCTTTACTGGAGTGGTAGCCAAGAGCAGAGGAGAGATATCAGAGGAGGTGGTGGAGGTGGAAAATTTGAAAGGAGGGGAGAAATTAACAACTTGACCATGCCATTGGGTAGTTTGAATGCTAGTAGTAGTAGTAGCCAAGAGCAAAGGAGAGAGATAAACAAGGAAATATGGTCGAGAGGAGAGACCACTAGCACTGTGCCACTGCCATCAAGCTACTTGCAGGTCCCAAGGCCTAATTACTGGGATGTTAGTAGTAGTGGTAGTAGAAGAAGAAGAAACCAAGAGCAGGAAAGAGTGGTTGACAATGGAAGGCGAGAGATTAACCCATCTTCAAGGGATTCGCAGGCAAGAAGGCCTAATTACTGGAATGGTAGTAATAGTAATATTAATAGCCTAGAGCAAAGGAGAGAGATTAACCAGGAAAGACGGCCGAGTGTAGAGACCACTTGCACTGTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTCACTGGAATGGTAGTAATAGCAGTAGGCAAAAGCAAAGGAGAGAGATTGACCAGGAAAGACGGTCGAGTGTAGAGATCACTGGCACTTTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATGGTATTAATAGCAGTAAACAAGTGCAAAGGAGAGAGATTGACCAGGAAAGACGGTCGAGTGTAGAGATCACTGGCACTTTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATGGTATTAATAGCAGTAAACAAGTGCAAAGGAGAGAGATTGACCAGGAAAGACGGTCGAGTGTAGAGATCACTGGCACTTTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATCGTAGTAATCGCAGTAGGCAAGGGCAAAGGAGAGAGATTGTGCAGGAAAGACGGCCGAGTGTAGAAACCACTGGCACTGTGCCATTAAACCATTCGCAGGTCTCAAGGCCTGGTTACTGGAATGGTAGTAATAGTAGTAGCCAAGAGCAAAGGAGAGAGATTGACCAGGAAAGACGGCCGACAGACACTGGCATTGTGCCTAGTTACTGGAATTCGCAAGAGCTGAAAAGAGATGAGAACAGGAGGTTACAAGAGAGGGGAGACATTAACCAGGCAGCGAGGGAACCGAGAAGCCAGAGCCAGGCTAGGCCATTGCCTACTTATTGGGAGGGCAGTAGTAGTAGTAGTAATCAATTGGTGAAGTATAGGGGGAAAAAGGGTGATCAGAGTGATGGGGTTAGTAGTAAAGTGAGGGATGGGAATAGGGTAAGTGAGTTGCAGAACAAGGAAGATAAGGAAAGAGTATTAACAAATGGAAGTGGTACTGGTAGGAAGTTGAAAGGGAATGAGATGGATGGTGGTGCTGCTGCATGCCCTATTTGCTTGGAGCCTTGGACTAGCGACGGGGACCACTCAGTTTGTTGCCTACCTTGCGGCCACCTATATGGTATGTCTTGCATCAAGAATTGGCTTGAGCAGGCAAATTCAAGGAAGTGCCCACAATGCAATGAGGCTTGCAATTTAGAAGAAGTCAGGAGAGTATATGGATTAAGTATTGGAGCCAAGGACAAAGAGTTACAAGAGAAAATCAAGTTACTTGAGGCTAAATGTGCTTCTCTGGAGCTGAAGGATAATGATTGGCAGAAGAAGGAAGCTGAGTGGCGCCAAAGAGAAGTCCATTTGCGCCTGCAACAGTACAAAGGCAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113196.p1 GENE.R_Transcript_113196~~R_Transcript_113196.p1 ORF type:complete len:824 (+),score=181.37,zf-RING_2|PF13639.2|1.8e-08,zf-C3HC4_2|PF13923.2|7.6e-06,zf-RING_UBOX|PF13445.2|1.3e-05,zf-C3HC4|PF00097.21|1.6e-05 R_Transcript_113196:132-2603(+)
MDYDHDSDNYDQDDDYVGYYHDQQEEEDNCFYDNDNVAYGANYYDNGSDSSSHAEPFTGAGAGDFGFWGEFLAGSEGKGEEDYDCDDHDREDDHHCLWGDVEVEPDNYHDDNDDDDDEFGEEWEVRIEDSDGDGDFRGGDLVIEYEDEVQNEVEVEHEDDEDEDEYVEEEVELDHHVYSNVASVGNILSSSLMYRVPVQFPQDDDDHVMGYWWNRDSGINDNRSEETRGEIKQEGIKRREINETRLYWSGSQEQRRDIRGGGGGGKFERRGEINNLTMPLGSLNASSSSSQEQRREINKEIWSRGETTSTVPLPSSYLQVPRPNYWDVSSSGSRRRRNQEQERVVDNGRREINPSSRDSQARRPNYWNGSNSNINSLEQRREINQERRPSVETTCTVPSNYSQVSRPSHWNGSNSSRQKQRREIDQERRSSVEITGTLPSNYSQVSRPSYWNGINSSKQVQRREIDQERRSSVEITGTLPSNYSQVSRPSYWNGINSSKQVQRREIDQERRSSVEITGTLPSNYSQVSRPSYWNRSNRSRQGQRREIVQERRPSVETTGTVPLNHSQVSRPGYWNGSNSSSQEQRREIDQERRPTDTGIVPSYWNSQELKRDENRRLQERGDINQAAREPRSQSQARPLPTYWEGSSSSSNQLVKYRGKKGDQSDGVSSKVRDGNRVSELQNKEDKERVLTNGSGTGRKLKGNEMDGGAAACPICLEPWTSDGDHSVCCLPCGHLYGMSCIKNWLEQANSRKCPQCNEACNLEEVRRVYGLSIGAKDKELQEKIKLLEAKCASLELKDNDWQKKEAEWRQREVHLRLQQYKGS*

Click here to download the sequence:
Link to NCBI Protein BLAST