Transcript Information: R_Transcript_113197.p1


Annotated TAIR IDAT5G03450.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:858954-862238 | Reverse length=630
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.23961541131296
Replicate 31.2090574765444
Condition 2: 8 Hour
Replicate 11.0478972160019
Replicate 22.4561881622986
Replicate 30
Condition 3: 24 Hour
Replicate 10.68775171438201
Replicate 20
Replicate 32.2480952032191


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113197.p1 GENE.R_Transcript_113197~~R_Transcript_113197.p1 ORF type:complete len:701 (+),score=164.08,zf-RING_2|PF13639.2|1.5e-08,zf-C3HC4_2|PF13923.2|6.2e-06,zf-RING_UBOX|PF13445.2|1.1e-05,zf-C3HC4|PF00097.21|1.3e-05 R_Transcript_113197:132-2234(+)
ATGGACTATGACCATGATTCCGACAACTACGACCAAGACGACGACTATGTGGGTTACTACCATGACCAACAAGAAGAAGAAGACAACTGCTTCTACGACAACGACAACGTCGCATACGGCGCCAATTACTACGACAATGGCAGTGACTCGTCGTCTCATGCGGAGCCCTTCACCGGCGCCGGTGCCGGAGACTTCGGGTTTTGGGGCGAATTTTTGGCCGGATCTGAAGGCAAAGGCGAAGAGGATTACGATTGTGATGATCATGATAGAGAGGACGACCATCATTGCCTTTGGGGAGACGTTGAGGTTGAACCTGACAACTATCATGATGACAACGACGATGATGATGATGAATTTGGGGAAGAATGGGAGGTCAGAATCGAAGATAGTGATGGTGATGGTGATTTTAGAGGTGGTGATTTAGTGATTGAATATGAAGATGAAGTTCAAAATGAAGTTGAAGTTGAACATGAGGATGATGAGGATGAGGATGAATATGTAGAAGAGGAGGTTGAATTGGACCATCATGTGTACAGTAATGTTGCTTCAGTTGGAAATATTCTATCATCATCTTTAATGTACAGAGTGCCAGTTCAGTTTCCGCAGGATGATGATGATCATGTTATGGGGTACTGGTGGAATCGGGATAGTGGTATTAATGATAATAGGAGCGAAGAAACGAGAGGTGAGATTAAGCAAGAAGGGATCAAAAGGAGAGAGATTAACGAGACGAGGCTTTACTGGAGTGGTAGCCAAGAGCAGAGGAGAGATATCAGAGGAGGTGGTGGAGGTGGAAAATTTGAAAGGAGGGGAGAAATTAACAACTTGACCATGCCATTGGGTAGTTTGAATGCTAGTAGTAGTAGTAGCCAAGAGCAAAGGAGAGAGATAAACAAGGAAATATGGTCGAGAGGAGAGACCACTAGCACTGTGCCACTGCCATCAAGCTACTTGCAGGTCCCAAGGCCTAATTACTGGGATGTTAGTAGTAGTGGTAGTAGAAGAAGAAGAAACCAAGAGCAGGAAAGAGTGGTTGACAATGGAAGGCGAGAGATTAACCCATCTTCAAGGGATTCGCAGGCAAGAAGGCCTAATTACTGGAATGGTAGTAATAGTAATATTAATAGCCTAGAGCAAAGGAGAGAGATTAACCAGGAAAGACGGCCGAGTGTAGAGACCACTTGCACTGTGCCATCAAACTATTCGCAGGTCTCAAGGCCTAGTTACTGGAATCGTAGTAATCGCAGTAGGCAAGGGCAAAGGAGAGAGATTGTGCAGGAAAGACGGCCGAGTGTAGAAACCACTGGCACTGTGCCATTAAACCATTCGCAGGTCTCAAGGCCTGGTTACTGGAATGGTAGTAATAGTAGTAGCCAAGAGCAAAGGAGAGAGATTGACCAGGAAAGACGGCCGACAGACACTGGCATTGTGCCTAGTTACTGGAATTCGCAAGAGCTGAAAAGAGATGAGAACAGGAGGTTACAAGAGAGGGGAGACATTAACCAGGCAGCGAGGGAACCGAGAAGCCAGAGCCAGGCTAGGCCATTGCCTACTTATTGGGAGGGCAGTAGTAGTAGTAGTAATCAATTGGTGAAGTATAGGGGGAAAAAGGGTGATCAGAGTGATGGGGTTAGTAGTAAAGTGAGGGATGGGAATAGGGTAAGTGAGTTGCAGAACAAGGAAGATAAGGAAAGAGTATTAACAAATGGAAGTGGTACTGGTAGGAAGTTGAAAGGGAATGAGATGGATGGTGGTGCTGCTGCATGCCCTATTTGCTTGGAGCCTTGGACTAGCGACGGGGACCACTCAGTTTGTTGCCTACCTTGCGGCCACCTATATGGTATGTCTTGCATCAAGAATTGGCTTGAGCAGGCAAATTCAAGGAAGTGCCCACAATGCAATGAGGCTTGCAATTTAGAAGAAGTCAGGAGAGTATATGGATTAAGTATTGGAGCCAAGGACAAAGAGTTACAAGAGAAAATCAAGTTACTTGAGGCTAAATGTGCTTCTCTGGAGCTGAAGGATAATGATTGGCAGAAGAAGGAAGCTGAGTGGCGCCAAAGAGAAGTCCATTTGCGCCTGCAACAGTACAAAGGCAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113197.p1 GENE.R_Transcript_113197~~R_Transcript_113197.p1 ORF type:complete len:701 (+),score=164.08,zf-RING_2|PF13639.2|1.5e-08,zf-C3HC4_2|PF13923.2|6.2e-06,zf-RING_UBOX|PF13445.2|1.1e-05,zf-C3HC4|PF00097.21|1.3e-05 R_Transcript_113197:132-2234(+)
MDYDHDSDNYDQDDDYVGYYHDQQEEEDNCFYDNDNVAYGANYYDNGSDSSSHAEPFTGAGAGDFGFWGEFLAGSEGKGEEDYDCDDHDREDDHHCLWGDVEVEPDNYHDDNDDDDDEFGEEWEVRIEDSDGDGDFRGGDLVIEYEDEVQNEVEVEHEDDEDEDEYVEEEVELDHHVYSNVASVGNILSSSLMYRVPVQFPQDDDDHVMGYWWNRDSGINDNRSEETRGEIKQEGIKRREINETRLYWSGSQEQRRDIRGGGGGGKFERRGEINNLTMPLGSLNASSSSSQEQRREINKEIWSRGETTSTVPLPSSYLQVPRPNYWDVSSSGSRRRRNQEQERVVDNGRREINPSSRDSQARRPNYWNGSNSNINSLEQRREINQERRPSVETTCTVPSNYSQVSRPSYWNRSNRSRQGQRREIVQERRPSVETTGTVPLNHSQVSRPGYWNGSNSSSQEQRREIDQERRPTDTGIVPSYWNSQELKRDENRRLQERGDINQAAREPRSQSQARPLPTYWEGSSSSSNQLVKYRGKKGDQSDGVSSKVRDGNRVSELQNKEDKERVLTNGSGTGRKLKGNEMDGGAAACPICLEPWTSDGDHSVCCLPCGHLYGMSCIKNWLEQANSRKCPQCNEACNLEEVRRVYGLSIGAKDKELQEKIKLLEAKCASLELKDNDWQKKEAEWRQREVHLRLQQYKGS*

Click here to download the sequence:
Link to NCBI Protein BLAST