Transcript Information: R_Transcript_113257.p1


Annotated TAIR IDAT4G23840.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12400379-12403190 | Forward length=597
E-Value2.2E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9826763383823
Replicate 25.9888776355213
Replicate 35.957289139939
Condition 2: 8 Hour
Replicate 15.2176255843962
Replicate 26.1529943321383
Replicate 37.400740571735
Condition 3: 24 Hour
Replicate 18.243239507934
Replicate 25.7358475302676
Replicate 37.2714186711504


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113257.p1 GENE.R_Transcript_113257~~R_Transcript_113257.p1 ORF type:complete len:596 (+),score=92.45,LRR_4|PF12799.3|1.7e+03,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|6.9e-05,LRR_4|PF12799.3|35,LRR_4|PF12799.3|5.5e-06,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|0.76,LRR_4|PF12799.3|33,LRR_4|PF12799.3|1.9e+03,LRR_8|PF13855.2|17,LRR_8|PF13855.2|0.033,LRR_8|PF13855.2|0.0093,LRR_8|PF13855.2|0.35,LRR_8|PF13855.2|4.8e-08,LRR_8|PF13855.2|0.0065,LRR_8|PF13855.2|5.4e+02,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|55,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|31,LRR_1|PF00560.29|7.6,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|15,LRR_1|PF00560.29|8.1e+02,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|43,LRR_6|PF13516.2|2.5e+03,LRR_6|PF13516.2|1.2,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|3.6e+02,LRR_6|PF13516.2|17,LRR_6|PF13516.2|6.7e+02,LRR_6|PF13516.2|1.2e+03,LRR_6|PF13516.2|1.4e+02,LRR_6|PF13516.2|2.5e+03,LRR_6|PF13516.2|3.9e+03,LRR_6|PF13516.2|4.4e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|1.6e+04 R_Transcript_113257:27-1814(+)
ATGGAAATAGACAGCCCACTGGTAAGACTTTGCATCGAAGTAGCAACCGAGAGCAGAGAAGCCGTCGAGAGATGGTGGTTACAACGCCGTACACTCCAACGCTTACCTTCTCCGATCGCCTCCGCACTTCTTCACCGCCTTTTACATCGCTGCCTTCTTCATCCTTCTTTGCTCGAAATATTTAAATTCAGTGTTGAGGAGGTTGACCTAAGAGGGGAGAATTTCGTGGATGTCGAATGGATGGCTTACTTGGGAGCGTTTCCCTATTTGCGCTCACTTAATGTGGCAGACTGCTACCGGGTTAATAACTCTGCTCTTTGGCCACTTGCAGGATTGACAAGCTTGAAGGAGCTTGACCTTTCAAGATGTATGAAAGTTACTGATGCTGGTATCAAGCATCTTCAATCCATTTCAATGATGGAAAAATTGCACCTTGCACAGACAGGGGTAACTGCTAATGGTATTAAGCTTCTCTCTGCACTCCCAAACCTTAGTACATTGGATCTGGGAGGCTTACCTGTTTCTGATTTGGCACTGAATTCACTCCAGGTACTGAAAAACCTTGAGCACCTCGACCTTTGGGGGAGTAAAATATCAGATGAAGGAGCAGTGACTTTTAAGATGTTCCCCAAGTTGATCACCTTGGGTCTAGCCTGGACAAAGGTCACAAAGTTGCCAAATTTGAAGTCTCTGAGATGCTTAGACATGAGTAACTGCCCCATCCATTCTTTGATGGAAGATGGAAGTGACATATCAGCCCTGAAAAAGCTAATTGTTCAAGGGGCCTCATTCCTTGATGCTGAGAAAGCCTTTTTGAGTATTGATGCAAGCGCCCTGTCTTTCTTGAATCTATCCTACACCTCGCTTAGTCATTTCAACTTTTTGCGTTATATGAATATGCTGGAACATTTGGATCTTAGCTTTAGTGGTATACTTGACGATGCAGTTGAAGCGGTTGCTTGTGTAGGTGCAAATCTTAGGCATTTAGATCTCAACAATACAAAAATCAGCTCTGCCGGGCTAGAGATCTTGGCCGGACATGTCCCTAATCTTGAAGTTCTTTCATTGTCTCACACATCTATTGATGATGTAGCTGTGGCTTATCTTAGCATGATGCCTTCACTGAAGGCTATTGACTTGAGCTATACAAATATTAAAGGTTTCATCCGCCAGATTAGCAATGAACAGGGTGAAATCCTCTCACTATCAGCGCTACAAGAACTGAAGCACTTGAGAACAGTAAACTTGGATGGGACCCATGTAACTGATGCAGCTATTCATGTACTATCAGGCGTTGAGGAGCTGAGTCATATATCACTAAGCAGTACCCCCCTAACAGATAGTTCCTTGGATCACCTGTCATTGGTAAATAAACTGGTAAATCTTAGCATTCATGGTGCTTTGTTGACCAATGGTGCTCTTGATGCGTTCAACCCACCAGTCACCCTTGAGTTGCTTGATTTAAGGGGCTGTTGGCTCTTAACTGTGGATGCTTTAACATCGTTTTGTGAAAATCATCCCTATATTAAAGTGATGCACGATCATCTCTCTATGCCCTTGTTGGACCCTGGCAATTCGCGCCTACCTGCAGGTTCCAATCAGAAGAGCTCAAACACTTCAAATTCAAAGAAAAAAGATGGAAGATTGCCGATATCTCCCATGGTCAAGAAGGATATTTTAGATCAAAGGATAAAGTACAGCAGAGCAGAGCTACTTTCTTTGCAGCACCTATGTTCTCTGCTTCCACCACCTAATGTAGTGGGTGCAGAAGGTCTTATGATGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113257.p1 GENE.R_Transcript_113257~~R_Transcript_113257.p1 ORF type:complete len:596 (+),score=92.45,LRR_4|PF12799.3|1.7e+03,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|6.9e-05,LRR_4|PF12799.3|35,LRR_4|PF12799.3|5.5e-06,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|0.76,LRR_4|PF12799.3|33,LRR_4|PF12799.3|1.9e+03,LRR_8|PF13855.2|17,LRR_8|PF13855.2|0.033,LRR_8|PF13855.2|0.0093,LRR_8|PF13855.2|0.35,LRR_8|PF13855.2|4.8e-08,LRR_8|PF13855.2|0.0065,LRR_8|PF13855.2|5.4e+02,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|55,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|31,LRR_1|PF00560.29|7.6,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|15,LRR_1|PF00560.29|8.1e+02,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|43,LRR_6|PF13516.2|2.5e+03,LRR_6|PF13516.2|1.2,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|3.6e+02,LRR_6|PF13516.2|17,LRR_6|PF13516.2|6.7e+02,LRR_6|PF13516.2|1.2e+03,LRR_6|PF13516.2|1.4e+02,LRR_6|PF13516.2|2.5e+03,LRR_6|PF13516.2|3.9e+03,LRR_6|PF13516.2|4.4e+03,LRR_6|PF13516.2|1.6e+04,LRR_6|PF13516.2|1.6e+04 R_Transcript_113257:27-1814(+)
MEIDSPLVRLCIEVATESREAVERWWLQRRTLQRLPSPIASALLHRLLHRCLLHPSLLEIFKFSVEEVDLRGENFVDVEWMAYLGAFPYLRSLNVADCYRVNNSALWPLAGLTSLKELDLSRCMKVTDAGIKHLQSISMMEKLHLAQTGVTANGIKLLSALPNLSTLDLGGLPVSDLALNSLQVLKNLEHLDLWGSKISDEGAVTFKMFPKLITLGLAWTKVTKLPNLKSLRCLDMSNCPIHSLMEDGSDISALKKLIVQGASFLDAEKAFLSIDASALSFLNLSYTSLSHFNFLRYMNMLEHLDLSFSGILDDAVEAVACVGANLRHLDLNNTKISSAGLEILAGHVPNLEVLSLSHTSIDDVAVAYLSMMPSLKAIDLSYTNIKGFIRQISNEQGEILSLSALQELKHLRTVNLDGTHVTDAAIHVLSGVEELSHISLSSTPLTDSSLDHLSLVNKLVNLSIHGALLTNGALDAFNPPVTLELLDLRGCWLLTVDALTSFCENHPYIKVMHDHLSMPLLDPGNSRLPAGSNQKSSNTSNSKKKDGRLPISPMVKKDILDQRIKYSRAELLSLQHLCSLLPPPNVVGAEGLMMD*

Click here to download the sequence:
Link to NCBI Protein BLAST