Transcript Information: R_Transcript_113271.p1


Annotated TAIR IDAT5G21140.1
Annotated Gene Nameembryo defective 1379
Annotated Gene Symbol(s)emb1379
Annotation TypeOrtholog
Chromosome Positionchr5:7187416-7189521 | Reverse length=312
E-Value2.3E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20980414890481
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.20863920253318
Condition 3: 24 Hour
Replicate 10
Replicate 20.2535087228802
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113271.p1 GENE.R_Transcript_113271~~R_Transcript_113271.p1 ORF type:5prime_partial len:174 (+),score=12.46,SMC_Nse1|PF07574.9|1.3e-21 R_Transcript_113271:2-523(+)
CGTCACTGGAAGAAACCCAGGTTTTTTCCTGCTTCCAAATTTTCAGTTTCATTTTCTGAGCAATATCCTTGTTTTTTAAAAAAAAAAAAAAGATTATACCTTTTTGCTTTTGGGGCAGGTGCTTATGAGCAGTTATTTAACGATTATCTGTTGAAAATAAACAAAGAGCTCTCACTTCTTCAATTAGAGTTAAGGGCGTGTAGAAACCAGTATGATGGTAAAGTCTATTATGGTCTCATTAATAATGTTGCTGATGATCATTCCAAGCTTGGCACCAAATATTCTATTGCTCAGATTGCCTTCTACAAAGGAATTATAGAAGCAATTGTACAAGATGCTGCAGGTCATGGTTGCATCAGCAACTTTACTGCCCTCCATATAAAGCTGGATAATCAGGTTTGTCCACTTTTCATACCGCAAACATTTTCTTTTCTTTTTTTTCATATGTTTTTTTTCTTTTTGTTTGTTTGTCTGTGTGTTGGGAGGGTCAGTGTTCTGTTATGTAACCTAGCAATTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113271.p1 GENE.R_Transcript_113271~~R_Transcript_113271.p1 ORF type:5prime_partial len:174 (+),score=12.46,SMC_Nse1|PF07574.9|1.3e-21 R_Transcript_113271:2-523(+)
RHWKKPRFFPASKFSVSFSEQYPCFLKKKKRLYLFAFGAGAYEQLFNDYLLKINKELSLLQLELRACRNQYDGKVYYGLINNVADDHSKLGTKYSIAQIAFYKGIIEAIVQDAAGHGCISNFTALHIKLDNQVCPLFIPQTFSFLFFHMFFFFLFVCLCVGRVSVLLCNLAII*

Click here to download the sequence:
Link to NCBI Protein BLAST