Transcript Information: R_Transcript_113271.p2


Annotated TAIR IDAT5G21140.1
Annotated Gene Nameembryo defective 1379
Annotated Gene Symbol(s)emb1379
Annotation TypeHomolog
Chromosome Positionchr5:7187416-7189521 | Reverse length=312
E-Value5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 22.1845861704819
Replicate 30.52963555135613
Condition 2: 8 Hour
Replicate 11.1322943328206
Replicate 20
Replicate 30.31476781422636
Condition 3: 24 Hour
Replicate 10.79622452812847
Replicate 20
Replicate 30.63259262100859


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113271.p2 GENE.R_Transcript_113271~~R_Transcript_113271.p2 ORF type:3prime_partial len:173 (+),score=39.91,SMC_Nse1|PF07574.9|6.9e-11,zf-RING-like|PF08746.7|4.2e-08 R_Transcript_113271:843-1358(+)
ATGCCTTTTCTAGAGACTGATATTTGTTATGCTAACAAACAGGCTCTTAGTAGTTCACAAGGACAGCCAGGGTCACAATCACAATCAGAAGATGTGCCTGCTGCACTAAAGTATTTCTCAATGTCTCAGAAGGAAAAGACCCTCGAGGAGCTTGTCCGTGATGGATGGCTCTATTCAAGCGAAGATGCTAACATTGGACTTGGTATTAGATCATTTCTTGATCTTCGGAGTTGGTTCCGCCATAATGATATTCCTGCATGTGAGGTTTGCAACGAGGCTGGAGTGAAGGCAGAGCTGTGCCCCTATGAAGGTTGTGCAGTCCGAATTCACAAGTACTGTCTAATTAAGAAATATTCCCAACCAAAGGCTGAAAAAATATGTCCTGTTTGTCGCAAACCATGGCCATATGTTGTTACTAAAGCTGAAGCTGTGGAGCTTGAGGATGATATATCTACACCAACAGAGAGACAACCTTCTAATGAGCCATCCCAGAGAAAAAGGAGAAGGAACTCCCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113271.p2 GENE.R_Transcript_113271~~R_Transcript_113271.p2 ORF type:3prime_partial len:173 (+),score=39.91,SMC_Nse1|PF07574.9|6.9e-11,zf-RING-like|PF08746.7|4.2e-08 R_Transcript_113271:843-1358(+)
MPFLETDICYANKQALSSSQGQPGSQSQSEDVPAALKYFSMSQKEKTLEELVRDGWLYSSEDANIGLGIRSFLDLRSWFRHNDIPACEVCNEAGVKAELCPYEGCAVRIHKYCLIKKYSQPKAEKICPVCRKPWPYVVTKAEAVELEDDISTPTERQPSNEPSQRKRRRNSQ

Click here to download the sequence:
Link to NCBI Protein BLAST