Transcript Information: R_Transcript_113356.p2


Annotated TAIR IDAT5G55310.1
Annotated Gene NameDNA topoisomerase 1 beta
Annotated Gene Symbol(s)TOP1BETA, TOP1
Annotation TypeHomolog
Chromosome Positionchr5:22430389-22434590 | Reverse length=917
E-Value7E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76693113255121
Replicate 21.9408344922628
Replicate 30.96246796622489
Condition 2: 8 Hour
Replicate 11.2345814259115
Replicate 20.56371971028199
Replicate 30.76267271514231
Condition 3: 24 Hour
Replicate 10.77169099925056
Replicate 20.3706766200097
Replicate 30.91965145743266


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113356.p2 GENE.R_Transcript_113356~~R_Transcript_113356.p2 ORF type:complete len:119 (+),score=26.02,Topo_C_assoc|PF14370.2|2.6e-19 R_Transcript_113356:721-1077(+)
ATGGAGAAACTTACCACAAGAATAAACGAAGCAAAGGCCGAGTTGAGTGAACTGGAGAAGGATCTAGCTCGAGCAAAGAAAGGAAAACCTCCATTGAAGGATGGTGATGGAAAGCAAAAGCGAAATTTGTCCCCTGAAGCGATTGAGAAGAAGATAAAGTCTACAAAAACAAAGATAGAGAAATATGAACGCGATATGCAGAACAAAGACAGTCTGAAAACAGCAGCGCTAGCCATATCAAAGACGAATTATCTTGATCCTAGGATCACAGTGGCTTGGTGCAAAACAAATGAAGTTCTCATTGAGAAGGTATATCATCCAGCTTTGACATCCTTTATGTCATTACCGATAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113356.p2 GENE.R_Transcript_113356~~R_Transcript_113356.p2 ORF type:complete len:119 (+),score=26.02,Topo_C_assoc|PF14370.2|2.6e-19 R_Transcript_113356:721-1077(+)
MEKLTTRINEAKAELSELEKDLARAKKGKPPLKDGDGKQKRNLSPEAIEKKIKSTKTKIEKYERDMQNKDSLKTAALAISKTNYLDPRITVAWCKTNEVLIEKVYHPALTSFMSLPIK*

Click here to download the sequence:
Link to NCBI Protein BLAST