Transcript Information: R_Transcript_113358.p1


Annotated TAIR IDAT5G55310.1
Annotated Gene NameDNA topoisomerase 1 beta
Annotated Gene Symbol(s)TOP1BETA, TOP1
Annotation TypeOrtholog
Chromosome Positionchr5:22430389-22434590 | Reverse length=917
E-Value1.1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1088247308941
Replicate 20
Replicate 31.9267349379941
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.42911789210662
Replicate 20.72143370202823
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113358.p1 GENE.R_Transcript_113358~~R_Transcript_113358.p1 ORF type:5prime_partial len:214 (+),score=5.60,Topoisom_I|PF01028.16|3e-21,Topoisom_I_N|PF02919.11|3.2e-07,Topoisom_I_N|PF02919.11|1.6e+03 R_Transcript_113358:1-642(+)
TATTCTCTTGCTCATTCAATTCTTCTCTCATACTTACCCCAAAACACTTTCAAATTCCGCAAAAAATTTATAAACACGATTCACCCCCCTCTCGTGTACTCTAACAGCCTCCTTTTTTTTGGAACTTTAATTTGGGACATGAATTCAAGACATTTAATCATTCTTTGCAGCTGGAAAGAAGTCAGGCATGACAACACTGTTACATGGTTGGCTTATTGGAATGATCCGATAAACTCTAAAAAGTGCAAGCATGTATTCTTGACACCCAGTAGTACACCAAAAGAGCAAAGTGACAAGGAAAAGTATGAGAAAGCAAGGAAGTTGAAGGATCATATTCAAGGTATTAGAGCAACATACACGAAGGATTTTACAAGTAAAGACGAGACCAAACAACATGTAGCTGTTGCGGCTTATCTCATTGATAGACTTGCACTCAGGGCCGGTAATGAGAAGAGAAATAGTTGGCAATTTACTCAATTAGACTTATGTTGGCTGCTGTACATTGAAAGTGGAGAATGTAGAACCAATACCACCAAACATATTAAAGGTAAGACAAGTTTCTTAGGTAGTTTTTTCGACAAAAACCATGTTTTAAAAGGAGTATACGTTTTAGTAGTAGAAATTCACCCAGGAACTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113358.p1 GENE.R_Transcript_113358~~R_Transcript_113358.p1 ORF type:5prime_partial len:214 (+),score=5.60,Topoisom_I|PF01028.16|3e-21,Topoisom_I_N|PF02919.11|3.2e-07,Topoisom_I_N|PF02919.11|1.6e+03 R_Transcript_113358:1-642(+)
YSLAHSILLSYLPQNTFKFRKKFINTIHPPLVYSNSLLFFGTLIWDMNSRHLIILCSWKEVRHDNTVTWLAYWNDPINSKKCKHVFLTPSSTPKEQSDKEKYEKARKLKDHIQGIRATYTKDFTSKDETKQHVAVAAYLIDRLALRAGNEKRNSWQFTQLDLCWLLYIESGECRTNTTKHIKGKTSFLGSFFDKNHVLKGVYVLVVEIHPGTN*

Click here to download the sequence:
Link to NCBI Protein BLAST