Transcript Information: R_Transcript_113358.p2


Annotated TAIR IDAT5G55310.1
Annotated Gene NameDNA topoisomerase 1 beta
Annotated Gene Symbol(s)TOP1BETA, TOP1
Annotation TypeOrtholog
Chromosome Positionchr5:22430389-22434590 | Reverse length=917
E-Value3.6E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5935124643008
Replicate 21.8330103538038
Replicate 31.0907970283882
Condition 2: 8 Hour
Replicate 12.1376548763468
Replicate 22.1296077943986
Replicate 32.0168456244874
Condition 3: 24 Hour
Replicate 10.54661445780248
Replicate 21.5753756350412
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113358.p2 GENE.R_Transcript_113358~~R_Transcript_113358.p2 ORF type:complete len:126 (+),score=29.86,Topo_C_assoc|PF14370.2|7.4e-29 R_Transcript_113358:1006-1383(+)
ATGGAGAAACTTACCACAAGAATAAACGAAGCAAAGGCCGAGTTGAGTGAACTGGAGAAGGATCTAGCTCGAGCAAAGAAAGGAAAACCTCCATTGAAGGATGGTGATGGAAAGCAAAAGCGAAATTTGTCCCCTGAAGCGATTGAGAAGAAGATAAAGTCTACAAAAACAAAGATAGAGAAATATGAACGCGATATGCAGAACAAAGACAGTCTGAAAACAGCAGCGCTAGCCATATCAAAGACGAATTATCTTGATCCTAGGATCACAGTGGCTTGGTGCAAAACAAATGAAGTTCTCATTGAGAAGGTCTTTAACAAGTCCCAACTGGAAAAATTTTCATGGGCAATGGATACTCATCCCAGCTTCAGATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113358.p2 GENE.R_Transcript_113358~~R_Transcript_113358.p2 ORF type:complete len:126 (+),score=29.86,Topo_C_assoc|PF14370.2|7.4e-29 R_Transcript_113358:1006-1383(+)
MEKLTTRINEAKAELSELEKDLARAKKGKPPLKDGDGKQKRNLSPEAIEKKIKSTKTKIEKYERDMQNKDSLKTAALAISKTNYLDPRITVAWCKTNEVLIEKVFNKSQLEKFSWAMDTHPSFRF*

Click here to download the sequence:
Link to NCBI Protein BLAST