Transcript Information: R_Transcript_113358.p3


Annotated TAIR IDAT5G55300.2
Annotated Gene NameDNA topoisomerase I alpha
Annotated Gene Symbol(s)TOP1ALPHA
Annotation TypeHomolog
Chromosome Positionchr5:22424701-22429045 | Reverse length=933
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38836087137699
Replicate 20
Replicate 30.73106609349423
Condition 2: 8 Hour
Replicate 10.52097584994139
Replicate 20.71364516514422
Replicate 30.38620448128483
Condition 3: 24 Hour
Replicate 10.48846398356817
Replicate 21.6424128961068
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113358.p3 GENE.R_Transcript_113358~~R_Transcript_113358.p3 ORF type:complete len:94 (+),score=9.05,Topoisom_I|PF01028.16|4.3e-16 R_Transcript_113358:749-1030(+)
ATGAAAGGAGTGGGCGGTGATGCTTTGTTTCGCAAATTGAACACAAGTAAACTGAATGCACATCTTAAGGAACTAATACCTGGCCTCACTGCTAAAGTCTTCCGTACTTATAATGCATCTTACACATTTGATAACTTGGGGCTGGGAGTAGAGAGGTTTCGGAGAAGGTTGCCATTTTATCATCAAGCGAACAAGGAGATAAAGTTGCAATCATTTGTAATCATCAACGGAAAGTGTCAAAGTCTCATTCTTCTCAGATGGAGAAACTTACCACAAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113358.p3 GENE.R_Transcript_113358~~R_Transcript_113358.p3 ORF type:complete len:94 (+),score=9.05,Topoisom_I|PF01028.16|4.3e-16 R_Transcript_113358:749-1030(+)
MKGVGGDALFRKLNTSKLNAHLKELIPGLTAKVFRTYNASYTFDNLGLGVERFRRRLPFYHQANKEIKLQSFVIINGKCQSLILLRWRNLPQE*

Click here to download the sequence:
Link to NCBI Protein BLAST