Transcript Information: R_Transcript_113360.p1


Annotated TAIR IDAT5G55310.1
Annotated Gene NameDNA topoisomerase 1 beta
Annotated Gene Symbol(s)TOP1BETA, TOP1
Annotation TypeOrtholog
Chromosome Positionchr5:22430389-22434590 | Reverse length=917
E-Value2.4E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68326591809108
Replicate 20
Replicate 31.3474551527148
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.73661413564826
Replicate 21.297368170034
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113360.p1 GENE.R_Transcript_113360~~R_Transcript_113360.p1 ORF type:5prime_partial len:187 (+),score=12.16,Topoisom_I|PF01028.16|2.3e-21,Topoisom_I_N|PF02919.11|1.8e-07,Topoisom_I_N|PF02919.11|1.1e+03 R_Transcript_113360:1-561(+)
GTAGTTGTGAAAATCCTACTTGAGAGTGTAGGTCGTGATTTTTACTCCAACTCGCGCATTAGAGGTTTTCCACGGTGTAAAAATCTTGTCTGGAAAGAAGTCAGGCATGACAACACTGTTACATGGTTGGCTTATTGGAATGATCCGATAAACTCTAAAAAGTGCAAGCATGTATTCTTGACACCCAGTAGTACACCAAAAGAGCAAAGTGACAAGGAAAAGTATGAGAAAGCAAGGAAGTTGAAGGATCATATTCAAGGTATTAGAGCAACATACACGAAGGATTTTACAAGTAAAGACGAGACCAAACAACATGTAGCTGTTGCGGCTTATCTCATTGATAGACTTGCACTCAGGGCCGGTAATGAGAAGAGAAATAGTTGGCAATTTACTCAATTAGACTTATGTTGGCTGCTGTACATTGAAAGTGGAGAATGTAGAACCAATACCACCAAACATATTAAAGGTAAGACAAGTTTCTTAGGTAGTTTTTTCGACAAAAACCATGTTTTAAAAGGAGTATACGTTTTAGTAGTAGAAATTCACCCAGGAACTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113360.p1 GENE.R_Transcript_113360~~R_Transcript_113360.p1 ORF type:5prime_partial len:187 (+),score=12.16,Topoisom_I|PF01028.16|2.3e-21,Topoisom_I_N|PF02919.11|1.8e-07,Topoisom_I_N|PF02919.11|1.1e+03 R_Transcript_113360:1-561(+)
VVVKILLESVGRDFYSNSRIRGFPRCKNLVWKEVRHDNTVTWLAYWNDPINSKKCKHVFLTPSSTPKEQSDKEKYEKARKLKDHIQGIRATYTKDFTSKDETKQHVAVAAYLIDRLALRAGNEKRNSWQFTQLDLCWLLYIESGECRTNTTKHIKGKTSFLGSFFDKNHVLKGVYVLVVEIHPGTN*

Click here to download the sequence:
Link to NCBI Protein BLAST