Transcript Information: R_Transcript_113362.p1


Annotated TAIR IDAT5G55310.1
Annotated Gene NameDNA topoisomerase 1 beta
Annotated Gene Symbol(s)TOP1BETA, TOP1
Annotation TypeHomolog
Chromosome Positionchr5:22430389-22434590 | Reverse length=917
E-Value2E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.88798188428362
Replicate 20.68096109458264
Replicate 30
Condition 2: 8 Hour
Replicate 11.1912042406768
Replicate 20.72521778944386
Replicate 31.4717522124638
Condition 3: 24 Hour
Replicate 10.86867378699421
Replicate 20
Replicate 31.1831191722647


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113362.p1 GENE.R_Transcript_113362~~R_Transcript_113362.p1 ORF type:5prime_partial len:185 (+),score=23.00,Topoisom_I|PF01028.16|1.5e-24,Topoisom_I_N|PF02919.11|1.8e-07,Topoisom_I_N|PF02919.11|1.2e+03,Topoisom_I_N|PF02919.11|2.3e+02 R_Transcript_113362:1-555(+)
GTAGTTGTGAAAATCCTACTTGAGAGTGTAGGTCGTGATTTTTACTCCAACTCGCGCATTAGAGGTTTTCCACGGTGTAAAAATCTTGTCTGGAAAGAAGTCAGGCATGACAACACTGTTACATGGTTGGCTTATTGGAATGATCCGATAAACTCTAAAAAGTGCAAGCATGTATTCTTGACACCCAGTAGTACACCAAAAGAGCAAAGTGACAAGGAAAAGTATGAGAAAGCAAGGAAGTTGAAGGATCATATTCAAGGTATTAGAGCAACATACACGAAGGATTTTACAAGTAAAGACGAGACCAAACAACATGTAGCTGTTGCGGCTTATCTCATTGATAGACTTGCACTCAGGGCCGGTAATGAGAAGAGAAATAGTTGGCAATTTACTCAATTAGACTTATGTTGGCTGCTGTACATTGAAAGTGGAGAATGTAGAACCAATACCACCAAACATATTAAAGATTCAATCAAGTACGAAAAGCAATTTGAAGCCGAGCCTCTTGTGTACAAAGCTATTGAGCAATTCAGACATGAAAGGAGTGGGCGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113362.p1 GENE.R_Transcript_113362~~R_Transcript_113362.p1 ORF type:5prime_partial len:185 (+),score=23.00,Topoisom_I|PF01028.16|1.5e-24,Topoisom_I_N|PF02919.11|1.8e-07,Topoisom_I_N|PF02919.11|1.2e+03,Topoisom_I_N|PF02919.11|2.3e+02 R_Transcript_113362:1-555(+)
VVVKILLESVGRDFYSNSRIRGFPRCKNLVWKEVRHDNTVTWLAYWNDPINSKKCKHVFLTPSSTPKEQSDKEKYEKARKLKDHIQGIRATYTKDFTSKDETKQHVAVAAYLIDRLALRAGNEKRNSWQFTQLDLCWLLYIESGECRTNTTKHIKDSIKYEKQFEAEPLVYKAIEQFRHERSGR*

Click here to download the sequence:
Link to NCBI Protein BLAST