Transcript Information: R_Transcript_113437.p1


Annotated TAIR IDAT1G24620.1
Annotated Gene NameEF hand calcium-binding protein family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8723893-8724453 | Reverse length=186
E-Value8E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 162.565180630954
Replicate 258.499126317107
Replicate 356.906675160253
Condition 2: 8 Hour
Replicate 186.085525191887
Replicate 286.490203347982
Replicate 3107.76805299148
Condition 3: 24 Hour
Replicate 179.413798586398
Replicate 278.23374851752
Replicate 388.927403948023


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113437.p1 GENE.R_Transcript_113437~~R_Transcript_113437.p1 ORF type:complete len:159 (+),score=43.46,EF-hand_1|PF00036.28|7.6e-05,EF-hand_1|PF00036.28|0.14,EF-hand_1|PF00036.28|2.8e-05,EF-hand_1|PF00036.28|0.0047,EF-hand_7|PF13499.2|1.4e-10,EF-hand_7|PF13499.2|4.8e-07,EF-hand_6|PF13405.2|0.00011,EF-hand_6|PF13405.2|5.8e+02,EF-hand_6|PF13405.2|40,EF-hand_6|PF13405.2|1.1e-05,EF-hand_6|PF13405.2|0.11,EF-hand_5|PF13202.2|0.00015,EF-hand_5|PF13202.2|2.2,EF-hand_5|PF13202.2|1.1,EF-hand_5|PF13202.2|0.012,EF-hand_8|PF13833.2|0.68,EF-hand_8|PF13833.2|9.9e-06,EF-hand_8|PF13833.2|0.0005 R_Transcript_113437:387-863(+)
ATGGCTCAGCTCGGAGCCGATCTCTCAGCTGAAGTGGAGAACCTAAGCCATGTGCTGAGCCTAATGCAAGCCTTCATTGCCTTCGACTCGGACAATGATGGGCGCATTAATGTAGCCGAGCTAGCCGGGATCATGGGATCACTGGGGTACAAGCTGACTGATGACGAGGTTCGAGCCATGATGAGCCAAGCTGGCACCAGCAGGGATGGACGGCTAAGCTTAGCCGAGTTCTTGGAGCTGAATACCAAAGACATGGAGCTGGGGAGCTTAGCCACCATCCTAAAGTCAGCGTTTGAGTCAATCGATGTTGATGGAGATGATGTGATCACAGGGGAAGAGCTCTTCCAAGCAATGAGGGAAATGGGGGTTGGGTTTTCTTTTGAGGATTGTCAAGAGATTGTAGCCTCTATGGATGGGAATGGGGATGGTGCTGTTACCTCTCAAGAGCTTAAGCTTCTCATTGATTCCCTTCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113437.p1 GENE.R_Transcript_113437~~R_Transcript_113437.p1 ORF type:complete len:159 (+),score=43.46,EF-hand_1|PF00036.28|7.6e-05,EF-hand_1|PF00036.28|0.14,EF-hand_1|PF00036.28|2.8e-05,EF-hand_1|PF00036.28|0.0047,EF-hand_7|PF13499.2|1.4e-10,EF-hand_7|PF13499.2|4.8e-07,EF-hand_6|PF13405.2|0.00011,EF-hand_6|PF13405.2|5.8e+02,EF-hand_6|PF13405.2|40,EF-hand_6|PF13405.2|1.1e-05,EF-hand_6|PF13405.2|0.11,EF-hand_5|PF13202.2|0.00015,EF-hand_5|PF13202.2|2.2,EF-hand_5|PF13202.2|1.1,EF-hand_5|PF13202.2|0.012,EF-hand_8|PF13833.2|0.68,EF-hand_8|PF13833.2|9.9e-06,EF-hand_8|PF13833.2|0.0005 R_Transcript_113437:387-863(+)
MAQLGADLSAEVENLSHVLSLMQAFIAFDSDNDGRINVAELAGIMGSLGYKLTDDEVRAMMSQAGTSRDGRLSLAEFLELNTKDMELGSLATILKSAFESIDVDGDDVITGEELFQAMREMGVGFSFEDCQEIVASMDGNGDGAVTSQELKLLIDSLL*

Click here to download the sequence:
Link to NCBI Protein BLAST