Transcript Information: R_Transcript_113514.p1


Annotated TAIR IDAT5G09840.1
Annotated Gene NamePutative endonuclease or glycosyl hydrolase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3059027-3061970 | Forward length=924
E-Value3.2E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1154093821694
Replicate 21.390483471278
Replicate 31.5675692394718
Condition 2: 8 Hour
Replicate 11.513475096077
Replicate 21.1600015966178
Replicate 31.803140127853
Condition 3: 24 Hour
Replicate 13.0407691692323
Replicate 22.799508578826
Replicate 33.1406198778109


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113514.p1 GENE.R_Transcript_113514~~R_Transcript_113514.p1 ORF type:complete len:906 (+),score=209.04,OST-HTH|PF12872.3|4e-05,OST-HTH|PF12872.3|2.8e-05,NYN|PF01936.14|1.3e-06,NYN|PF01936.14|7.1e+03 R_Transcript_113514:576-3293(+)
ATGTACTGGGTAACCCATAATCCACCACCTGCACATATTTTCTTGATATCTAGTGACAGGGATTTTGCTGGTATTTTACACAGATTGAGAATGAACAACTACAATATACTGCTTGCTGGTAAAGATGACAAACATACGCCTGGTGTTCTCTGTAGTGCTGCAAGCATCATGTGGCATTGGAATGAATTAGCTAAAGGAGAAAACCTTTCGGGTAGACATTTTAACCAGCCACCAGACGGCCCCTTCAATTCTTGGTATGGGCACTATAGAGGCCCCCTTGAGAATCCATTCGATGCACCGGAGCAGCAAGGCTCTTCAAAGGCTAATAATCCATTACTCGTTGAGCCCTTGTCAGACAAGAATCATCCAACACCGAAGGCTGTTTTGAAGCAGATTCGTCAAATAGTTAATTCATATCCAAATGGACTCTCCATTGTTGAACTTCGTGCGCAGCTGGCAAAAAGTAATGTGCTGCTTGACAAAAACTTCTATGGTTTTAAAAAATTTTCTAGCTTTTTGCTGTCAATCCCCCACATTTTGAAAGTTGTGCATCTTGCTGATGGTCAGTTCCTGCTACGTCCTGCTTCTTCTAATGTCCAAGGATCTGGCAAAAGTGATGATATATCTGCAGAGTCCATAACTGACAAGGAAAACCAGGATAGCAAGGTGAGTGCAAAAGCTAATTCTGAGACTCATTCAATAACTAGAATGGTGGAGGAGAAGAGAAGGTTGCCAGTGTCCTCTTATGATGTGAAAGAGAAAACAGTTGAAGAGAAGATGAAACAAGCACAATCAGTTAAAGATAAGATAAAAGAAGAGCAAACAGGTGAGGAGAAGATGAAAGAGATCCCTGACAAAAAGGTGTCAGGTGCTCCTTTAAGGGATGATCATCATGTTGCTTCTATGAAGGAATATCATAGCGAGGAACCATTGGATGCAAAGGAGTCCAAGTGTCTTGGAACTTCTACCGCTGAACAAAATAGTCTTGCGAATTCTAGTGAGCAACAAAAATCAATGAGTGAAAAAGCGGGTATTCTCAAAAGATTGCGGATGAGATGGCTTGGTAGAAGTTTTGAAAATGAAAATACAGATCTTACTAGTCCTGATAAATATAATACCTCTGATTGTAGCCCTGAAAAGTCAATTTCTGAAGAAGGGTATGCCCAAGCGACCAATGAACAAGAAACTTGTGGTCCATCGCTTTCTTCTTCCAGTACTGCATTACATGTTAATGGAACTAGTGATACAGTTTCTAAATCTGAAGCTAGTCCAGGTTTTATTCCGAAGATCTTAAGCTGGTTCAGTTCTTGGAGAAATGAGTCACCTGTATCTACTGTAACTGAACAAATGAGTAAAGAACCTAGCGACTCAAGGAATCATGAGGATAGTCCACAAACAAGTAAACATGAAGATGCTCCACAATTGAACAGGGATGACGTTGCTGCAGAGCTCAGGCAGCCCATAGATGCCTCACAGTCAACGAAGAACGAAGTTGCTCCACATTGCAGGAAGGGCGAAATCTCTTTGCAGTCAAGAAAGCATGGAGATGCTCCAGATTCAAAAAAACTTGAACTGTTGAAGAATTTCCCGTGGAGTGATGTCGAATCGTTCCTTAGAACTTACAGAGGATCAGAAATTGTCTTAAACTCAGCTTCAAGGTTGAACCTTGCAAAAAGGCTAAAGATGGAAGGATCTCAGGCTCTTCGATGTCTTCAGGAAAGTGATCTTCTTCAATTGGTAGATGCTTTAGTTTCAGAGAAGAAGTGGATTAAAGAGTTCCCCACTAAAAATCCTCGTTTTAGGATTCATCTCCCTCCTCCAGCCCAGAATATTTATTCAAGCTCATCCCAGGAAAATGTTCAGTTGGGAGTCCCATCTCCTACACACAAGAACCCTTCTGAAAAGCCCCGAAGTGAGATCTTGGCAGACTGTCAACAGCTCTTGGATGAGCTTTTACAGGAAAACCCTGAAGGCTTCAACATGGGTTTGTTTAAAAAGAAGTTTTACGACAAGTTTGGATATATTCTTGACTACCAGAAGCTTGGTTATGCTAAAATGGTGTCCCTTTTACAGATGATGCCCGGAGTTAAAGTAGAATGCCGTGAGGTTCTGCCTGATAGAGTGGTTTATGCTCCTGGCATCAGATCCTTGGGCTCAAACAAGAAGTTAGCTGGTTCAGATAGTGACATGTCTGATTCTCAACTGATGGATGAGGATGCCGAATCTCCCTGGGAGGAACTTGGACCTGTTTCAAAGTCAAATCTTTCTAAACAGGATGAGGATTTTGGTCTAAGCAACAAAAGCAGCAAGTACGAGCCATCAGTAGCGGAGGATGATGAATTGTCTGACACAGAAGATGAGTCGTCATCCTGCCCCAAAACAGAAGATCGAAGTAGGTCAAAGGTAAACAATGAAAGCTCGTTATTGCAAATCTTGAATTCATGGTATAGCATTAAGGAGGAAGGCAATCCGAAGGATCATGATTCAGATGTCGAGGGCTTGGTAGATTGTTCTAACGAGGAATCAAGGACGTCTGGCTCATCTTCCATTGGTATTAAAGATGATGCTTCTTCCAAAGTCAACATTGCATGGACATTACAGAAGCTACAAAAGAAATACAACTTTGTTTCGGAGTCTTCTGAGAGTAAGAAAGACCAGCTGATCGATGGCATATTGGGTACCTTGAAGAAGTCTGGCGACTCGAGGATGCAAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113514.p1 GENE.R_Transcript_113514~~R_Transcript_113514.p1 ORF type:complete len:906 (+),score=209.04,OST-HTH|PF12872.3|4e-05,OST-HTH|PF12872.3|2.8e-05,NYN|PF01936.14|1.3e-06,NYN|PF01936.14|7.1e+03 R_Transcript_113514:576-3293(+)
MYWVTHNPPPAHIFLISSDRDFAGILHRLRMNNYNILLAGKDDKHTPGVLCSAASIMWHWNELAKGENLSGRHFNQPPDGPFNSWYGHYRGPLENPFDAPEQQGSSKANNPLLVEPLSDKNHPTPKAVLKQIRQIVNSYPNGLSIVELRAQLAKSNVLLDKNFYGFKKFSSFLLSIPHILKVVHLADGQFLLRPASSNVQGSGKSDDISAESITDKENQDSKVSAKANSETHSITRMVEEKRRLPVSSYDVKEKTVEEKMKQAQSVKDKIKEEQTGEEKMKEIPDKKVSGAPLRDDHHVASMKEYHSEEPLDAKESKCLGTSTAEQNSLANSSEQQKSMSEKAGILKRLRMRWLGRSFENENTDLTSPDKYNTSDCSPEKSISEEGYAQATNEQETCGPSLSSSSTALHVNGTSDTVSKSEASPGFIPKILSWFSSWRNESPVSTVTEQMSKEPSDSRNHEDSPQTSKHEDAPQLNRDDVAAELRQPIDASQSTKNEVAPHCRKGEISLQSRKHGDAPDSKKLELLKNFPWSDVESFLRTYRGSEIVLNSASRLNLAKRLKMEGSQALRCLQESDLLQLVDALVSEKKWIKEFPTKNPRFRIHLPPPAQNIYSSSSQENVQLGVPSPTHKNPSEKPRSEILADCQQLLDELLQENPEGFNMGLFKKKFYDKFGYILDYQKLGYAKMVSLLQMMPGVKVECREVLPDRVVYAPGIRSLGSNKKLAGSDSDMSDSQLMDEDAESPWEELGPVSKSNLSKQDEDFGLSNKSSKYEPSVAEDDELSDTEDESSSCPKTEDRSRSKVNNESSLLQILNSWYSIKEEGNPKDHDSDVEGLVDCSNEESRTSGSSSIGIKDDASSKVNIAWTLQKLQKKYNFVSESSESKKDQLIDGILGTLKKSGDSRMQS*

Click here to download the sequence:
Link to NCBI Protein BLAST