Transcript Information: R_Transcript_11352.p1


Annotated TAIR IDAT1G73720.1
Annotated Gene Nametransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)SMU1
Annotation TypeOrtholog
Chromosome Positionchr1:27725059-27729722 | Forward length=511
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.267231361782
Replicate 224.917788431793
Replicate 326.561119858574
Condition 2: 8 Hour
Replicate 126.343741859585
Replicate 227.885846809728
Replicate 336.091334735478
Condition 3: 24 Hour
Replicate 135.598000701323
Replicate 234.370160255549
Replicate 337.387946916529


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11352.p1 GENE.R_Transcript_11352~~R_Transcript_11352.p1 ORF type:complete len:514 (+),score=92.89,WD40|PF00400.28|0.0025,WD40|PF00400.28|0.00016,WD40|PF00400.28|0.027,WD40|PF00400.28|2.9e-06,WD40|PF00400.28|9.8e+03,WD40|PF00400.28|2.7e+02,WD40|PF00400.28|1.4,Ge1_WD40|PF16529.1|0.71,Ge1_WD40|PF16529.1|0.43,Ge1_WD40|PF16529.1|0.076,Nup160|PF11715.4|1.2e+03,Nup160|PF11715.4|0.011,Nup160|PF11715.4|0.026 R_Transcript_11352:174-1715(+)
ATGTCGACCCTTGAGATTGAAGCTAGAGATGTGATAAAGATAGTGCTACAATTCTGCAAAGAGAATTCGCTACACCAAACGTTCCAAACCCTACAGAACGAATGCCAGGTTTCTCTCAACACCGTCGACAGTCTCGAGACCTTCATTGCCGATGTCAATGGCGGTCGCTGGGACGCCGTCTTGCCTCAAGTTTCTCAACTCAAACTCCCGAGAAAGAAACTCGAGGATTTATACGAACAGATTGTTTTGGAAATGATTGAGCTTCGAGAACTCGACACGGCACGTGCTATTTTGAGACAGACTCAAGTAATGGGTGTGATGAAACAAGAGCAACCTGAGAGATACTTGCGGTTGGAGCATCTTCTTGTTCGGACGTATTTTGATCCCCATGAGGCTTACCAAGATTCAACTAAAGAAAGACGGCGTGCACATATTGCCCAAGCTCTTTCCTCTGAAGTTTCTGTTGTGCCACCATCACGGTTAATGGCTTTGATTGGGCAAGCTTTAAAGTGGCAACAACATCAAGGTTTACTTCCTCCGGGAACCCAATTCGATTTATTCCGTGGAACAGCTGCAATGAAACAAGATGTTGAGGATATGTACCCCACAACACTTATGCATACAATTAAGTTTGGGAAGAAGAGTCACCCAGAATGTGCTCGATTTTCACCTGATGGACAGTTCCTTGTTTCTTGCTCCGTTGATGGGTTTATTGAGGTGTGGGATCACATCAGTGGCAAAATCAAGAAGGATCTTCAGTACCAGGCTGATGAACATTTCATGATGCATGATGAAGCTGTCCTATGTGTCGATTTTAGTAGAGATTCGGAGATGCTTGCTTCTGGTTCTCAAGATGGAAAGATCAAAGTGTGGCGTATGAGGACTGGTCAGTGTTTGCGGCGCCTTGAGCGTGCGCATTCTCAGGGGGTTACAAGCCTTTGTTTCTCTCGAGATGGAAGTCAAATACTAAGTACATCTTTTGACAGCACTGCAAGGATTCATGGTTTGAAGTCCGGGAAGCTGTTGAAAGAATTTCGTGGCCATGCCTCTTACGTCAATCATGCAATTTTTACAAATGATGGCAGTCGTATCATCACTGCGTCTAGTGATTGCACTGTTAAGGTTTGGGATGCCAAGACAACTGACTGTTTACAAACATTTAAACCGCCTCCTCCTCTAAGGGGTGGAGATGCTTCTGTGAATTCTGTTCATCTTTTCCCGAAAAACATGGATCACATTGTTGTTTGCAATAAGACGTCATCTATATATATCATGACTCTTCAAGGACAGGTTGTGAAGAGTTTCTCATCCGGTAAGAGAGAAGGTGGAGACTTTGTAGCTGCTAGCGTATCACCAAAGGGGGAGTGGATTTATTGTGTCGGTGAAGACAGGAATCTGTACTGTTTCAGCCATCAATCTGGTAAACTGGAGCATCTGATGAAGGTACACGAGAAGGATGTAATTGGTGTGACTCACCATCCTCACATGAATGTTGTTGCTACCTACGGAGAGGATTGCACGATGAAATTATGGAAGCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11352.p1 GENE.R_Transcript_11352~~R_Transcript_11352.p1 ORF type:complete len:514 (+),score=92.89,WD40|PF00400.28|0.0025,WD40|PF00400.28|0.00016,WD40|PF00400.28|0.027,WD40|PF00400.28|2.9e-06,WD40|PF00400.28|9.8e+03,WD40|PF00400.28|2.7e+02,WD40|PF00400.28|1.4,Ge1_WD40|PF16529.1|0.71,Ge1_WD40|PF16529.1|0.43,Ge1_WD40|PF16529.1|0.076,Nup160|PF11715.4|1.2e+03,Nup160|PF11715.4|0.011,Nup160|PF11715.4|0.026 R_Transcript_11352:174-1715(+)
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSLETFIADVNGGRWDAVLPQVSQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEHLLVRTYFDPHEAYQDSTKERRRAHIAQALSSEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLMHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIEVWDHISGKIKKDLQYQADEHFMMHDEAVLCVDFSRDSEMLASGSQDGKIKVWRMRTGQCLRRLERAHSQGVTSLCFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHASYVNHAIFTNDGSRIITASSDCTVKVWDAKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNMDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAASVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMKVHEKDVIGVTHHPHMNVVATYGEDCTMKLWKP*

Click here to download the sequence:
Link to NCBI Protein BLAST