Transcript Information: R_Transcript_11354.p1


Annotated TAIR IDAT1G73720.1
Annotated Gene Nametransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)SMU1
Annotation TypeOrtholog
Chromosome Positionchr1:27725059-27729722 | Forward length=511
E-Value2.2E-287
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0926961604136
Replicate 21.9614378308219
Replicate 34.0852780426259
Condition 2: 8 Hour
Replicate 11.8715310787703
Replicate 23.3707486427265
Replicate 33.2372299195595
Condition 3: 24 Hour
Replicate 13.3632456448229
Replicate 22.6691077638278
Replicate 32.6953012140978


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_11354.p1 GENE.R_Transcript_11354~~R_Transcript_11354.p1 ORF type:complete len:471 (+),score=77.11,WD40|PF00400.28|0.0022,WD40|PF00400.28|0.00014,WD40|PF00400.28|0.025,WD40|PF00400.28|2.6e-06,WD40|PF00400.28|8.8e+03,Ge1_WD40|PF16529.1|0.73,Ge1_WD40|PF16529.1|0.4,Ge1_WD40|PF16529.1|0.065,Nup160|PF11715.4|9.8e+02,Nup160|PF11715.4|0.012,Nup160|PF11715.4|0.055 R_Transcript_11354:174-1586(+)
ATGTCGACCCTTGAGATTGAAGCTAGAGATGTGATAAAGATAGTGCTACAATTCTGCAAAGAGAATTCGCTACACCAAACGTTCCAAACCCTACAGAACGAATGCCAGGTTTCTCTCAACACCGTCGACAGTCTCGAGACCTTCATTGCCGATGTCAATGGCGGTCGCTGGGACGCCGTCTTGCCTCAAGTTTCTCAACTCAAACTCCCGAGAAAGAAACTCGAGGATTTATACGAACAGATTGTTTTGGAAATGATTGAGCTTCGAGAACTCGACACGGCACGTGCTATTTTGAGACAGACTCAAGTAATGGGTGTGATGAAACAAGAGCAACCTGAGAGATACTTGCGGTTGGAGCATCTTCTTGTTCGGACGTATTTTGATCCCCATGAGGCTTACCAAGATTCAACTAAAGAAAGACGGCGTGCACATATTGCCCAAGCTCTTTCCTCTGAAGTTTCTGTTGTGCCACCATCACGGTTAATGGCTTTGATTGGGCAAGCTTTAAAGTGGCAACAACATCAAGGTTTACTTCCTCCGGGAACCCAATTCGATTTATTCCGTGGAACAGCTGCAATGAAACAAGATGTTGAGGATATGTACCCCACAACACTTATGCATACAATTAAGTTTGGGAAGAAGAGTCACCCAGAATGTGCTCGATTTTCACCTGATGGACAGTTCCTTGTTTCTTGCTCCGTTGATGGGTTTATTGAGGTGTGGGATCACATCAGTGGCAAAATCAAGAAGGATCTTCAGTACCAGGCTGATGAACATTTCATGATGCATGATGAAGCTGTCCTATGTGTCGATTTTAGTAGAGATTCGGAGATGCTTGCTTCTGGTTCTCAAGATGGAAAGATCAAAGTGTGGCGTATGAGGACTGGTCAGTGTTTGCGGCGCCTTGAGCGTGCGCATTCTCAGGGGGTTACAAGCCTTTGTTTCTCTCGAGATGGAAGTCAAATACTAAGTACATCTTTTGACAGCACTGCAAGGATTCATGGTTTGAAGTCCGGGAAGCTGTTGAAAGAATTTCGTGGCCATGCCTCTTACGTCAATCATGCAATTTTTACAAATGATGGCAGTCGTATCATCACTGCGTCTAGTGATTGCACTGTTAAGGTTTGGGATGCCAAGACAACTGACTGTTTACAAACATTTAAACCGCCTCCTCCTCTAAGGGGTGGAGATGCTTCTGTGAATTCTGTTCATCTTTTCCCGAAAAACATGGATCACATTGTTGTTTGCAATAAGACGTCATCTATATATATCATGACTCTTCAAGGACAGGTATGCTCGTCTACGTTGCATGGGGACGGAAACGGAAACGGTTGCGGGTACGGAAACGGGGACGGGGAAACGGCAAAGTCCAAAAATCAGGAAACGGGTTGTGAAGAGTTTCTCATCCGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_11354.p1 GENE.R_Transcript_11354~~R_Transcript_11354.p1 ORF type:complete len:471 (+),score=77.11,WD40|PF00400.28|0.0022,WD40|PF00400.28|0.00014,WD40|PF00400.28|0.025,WD40|PF00400.28|2.6e-06,WD40|PF00400.28|8.8e+03,Ge1_WD40|PF16529.1|0.73,Ge1_WD40|PF16529.1|0.4,Ge1_WD40|PF16529.1|0.065,Nup160|PF11715.4|9.8e+02,Nup160|PF11715.4|0.012,Nup160|PF11715.4|0.055 R_Transcript_11354:174-1586(+)
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSLETFIADVNGGRWDAVLPQVSQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEHLLVRTYFDPHEAYQDSTKERRRAHIAQALSSEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDMYPTTLMHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIEVWDHISGKIKKDLQYQADEHFMMHDEAVLCVDFSRDSEMLASGSQDGKIKVWRMRTGQCLRRLERAHSQGVTSLCFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHASYVNHAIFTNDGSRIITASSDCTVKVWDAKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNMDHIVVCNKTSSIYIMTLQGQVCSSTLHGDGNGNGCGYGNGDGETAKSKNQETGCEEFLIR*

Click here to download the sequence:
Link to NCBI Protein BLAST