Transcript Information: R_Transcript_113621.p1


Annotated TAIR IDAT4G28590.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14125367-14126828 | Reverse length=331
E-Value4.7E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4385615436338
Replicate 22.0078429359848
Replicate 33.5674427403844
Condition 2: 8 Hour
Replicate 13.0105571656449
Replicate 23.3602418067355
Replicate 32.8268901785849
Condition 3: 24 Hour
Replicate 13.8263012046174
Replicate 23.0130135096417
Replicate 33.5881483093274


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113621.p1 GENE.R_Transcript_113621~~R_Transcript_113621.p1 ORF type:complete len:366 (+),score=76.33 R_Transcript_113621:485-1582(+)
ATGGCTCTTTTGCCTGCAGCTATCTGGCCACAGCATCACCTTTCTTTCGGTACATCAAAACCCATCAACTATATTCATTCACAACATGAATCTTTCAATTCCCAAATTGCATCCTCTACAGTAAGTTGTATGCATTCAAGGCTTCCCAAATCCTTATCTATATTTCATGATGCCATCCGACGTCCTCGACATTGTGTCGCTGCACAAAGAGAATCAGGTCCAGCATCCAACTCTGAAAATGATGGTTCGGAAATCAAACCTCAAAAGAGCGGCCGCCCGAAGAAAAGCTTGGGTCATCAAACAAAAGTAGACAAATCTTTAAAACAATCACCAACAACAATCCCAAGAAAGCCGAGACGTGGTCGAAGAAGTGAAGCAGTTGCTGTTGAGGATTTTGTACGTGACTCGCTTGAGAGGACGTTTTCTTCAATCCGCGAGCAAAATCCTGATGTATTTGAGAATAAAGAACAAATTTTTAAAGATGCCAACTATAAGAATCTTTCTGATGTTAGTGATAATGATGAAGACGATGGTGATGATGATAGCCAAGGAGACAAGCAAATGGTAGTTGATGATGAGGATCCAGATTGGCCTGTTGACGCTGATGTGGGGTGGGGCACCAGGGCATCGGACTATTTCGAAAAATACCCGATCAAAAATGTGGTTGGAGATGATGGTTCTGAGATTGATTGGGAAGGCGAAATTGATGATAGCTGGGTACAGGAAATCAACTGCTTGGAATGGGAGAGTTTTGCTTTCCATCCAAGTCCCTTGATTGTTCTTGTTTTCGAAAGATACAACAGGGCAGCTGATAATTGGAAGCTTCTAAAGGAGATGGAGAAGGCTCTTCAGGTCTATTGGAATGCTAAAGATCGACTTCCTCCTCGTGCAGTCAAATTGGATATCAACATTGAGAGGGATTTAGCATACGCTCTGAAAGTTAGAGAGTGTCCTCAGATATTATTTCTACGTGGACAGAAGATTTTGTACCGGGAAAGAGAGCTAAGAAGTGCGGATGAATTGGTCCACATGATTGCTTATTTCTATTACAAAGCGAAGAAGCCTTCATGGATTGATGATGCAGCCCTAGCTTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113621.p1 GENE.R_Transcript_113621~~R_Transcript_113621.p1 ORF type:complete len:366 (+),score=76.33 R_Transcript_113621:485-1582(+)
MALLPAAIWPQHHLSFGTSKPINYIHSQHESFNSQIASSTVSCMHSRLPKSLSIFHDAIRRPRHCVAAQRESGPASNSENDGSEIKPQKSGRPKKSLGHQTKVDKSLKQSPTTIPRKPRRGRRSEAVAVEDFVRDSLERTFSSIREQNPDVFENKEQIFKDANYKNLSDVSDNDEDDGDDDSQGDKQMVVDDEDPDWPVDADVGWGTRASDYFEKYPIKNVVGDDGSEIDWEGEIDDSWVQEINCLEWESFAFHPSPLIVLVFERYNRAADNWKLLKEMEKALQVYWNAKDRLPPRAVKLDINIERDLAYALKVRECPQILFLRGQKILYRERELRSADELVHMIAYFYYKAKKPSWIDDAALAF*

Click here to download the sequence:
Link to NCBI Protein BLAST