Transcript Information: R_Transcript_113702.p1


Annotated TAIR IDAT3G06950.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2192869-2194254 | Forward length=323
E-Value5.3E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8979212910274
Replicate 210.009864151956
Replicate 39.4556881937606
Condition 2: 8 Hour
Replicate 16.6909049565147
Replicate 29.3603691428219
Replicate 36.2264245732723
Condition 3: 24 Hour
Replicate 19.7437205094326
Replicate 27.4372384631016
Replicate 310.180327761348


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113702.p1 GENE.R_Transcript_113702~~R_Transcript_113702.p1 ORF type:complete len:172 (+),score=15.37,PseudoU_synth_1|PF01416.16|2.6e-16 R_Transcript_113702:703-1218(+)
ATGTATCGGTACAGCATATATAATGGCCCCGTCATGGACCCCTTTCAGCGTCGATATGCATATCATAGTGTCTATAAGCTTAATGCATCTGTCATGGCAGAGGGTGCAAAGCATTTTATTGGAACGCATGACTTTTCTGCCTTTGCTAATGCGATTCGTAATGATGGAGTACGAGATCCTGTGAAGACTATATCCCGATTTGATATCAATGAAAAGGGACCTCTTGTAGAGCTGGAAGTAGAAGGCTCTGGTTTCTTGTATAGACAAGTCCGAAACATGGTTGCATTGTTACTTCAAATCGGAAGAGAAGCAGTTCCTCCTGATATGGAACCGATGATTATGGAAACAAGAGATCGCAAAGAATTGGCCAAGTATGCCTTGTCTGCCCCTGCTCACGGACTGTGTCTGGTAGAGGTGAAGTATAACGAGGAGCATATGCAGCTTCCCGTGCCATGTCCCGCAACCAGTTTTGGTAGGCGCCATACTATTACCAAATGTAAACTTCCTTTCTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113702.p1 GENE.R_Transcript_113702~~R_Transcript_113702.p1 ORF type:complete len:172 (+),score=15.37,PseudoU_synth_1|PF01416.16|2.6e-16 R_Transcript_113702:703-1218(+)
MYRYSIYNGPVMDPFQRRYAYHSVYKLNASVMAEGAKHFIGTHDFSAFANAIRNDGVRDPVKTISRFDINEKGPLVELEVEGSGFLYRQVRNMVALLLQIGREAVPPDMEPMIMETRDRKELAKYALSAPAHGLCLVEVKYNEEHMQLPVPCPATSFGRRHTITKCKLPFY*

Click here to download the sequence:
Link to NCBI Protein BLAST