Transcript Information: R_Transcript_113707.p2


Annotated TAIR IDAT3G06950.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2192869-2194254 | Forward length=323
E-Value5.5E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98285174371563
Replicate 21.4535900288206
Replicate 30.35241134763311
Condition 2: 8 Hour
Replicate 11.6951752655785
Replicate 21.5480610505436
Replicate 30.41888332200893
Condition 3: 24 Hour
Replicate 11.4127881370895
Replicate 20.33931167523965
Replicate 31.0102017547799


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113707.p2 GENE.R_Transcript_113707~~R_Transcript_113707.p2 ORF type:5prime_partial len:130 (+),score=7.17,PseudoU_synth_1|PF01416.16|9.7e-10 R_Transcript_113707:3-392(+)
AAAGCCAAAGCCATAGTCCTCATTCCGAGCGTTATCCCAGGGGATGAGTTGCGCAATCCGGGCCCCGTTGCCTCTCCTCCTCAATTCTTGCCTTTCTACTCCCAATCCTACTCTATCTGTATTTCCCCTATAATTATCTCTATAAACAATAATACATGTGGAGGGAACTCACAAGTATCCACTGAATTTCTCAAGCCCACAATTCCTCTCTTCAAATGGCGCTTAGTTATTTCCTATGATGGTACCCATTATGCTGGGTGGCAGTATCAAGTATCACCCCCAACAGTACAGTGTGCTATAGAGAAGGCTTTGATAGAGATCACGAAGTTGGATCGGAAAGACCTAAATTTAGTTGGTGCAGGCAGGACAGATACAGGAGTCCATGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113707.p2 GENE.R_Transcript_113707~~R_Transcript_113707.p2 ORF type:5prime_partial len:130 (+),score=7.17,PseudoU_synth_1|PF01416.16|9.7e-10 R_Transcript_113707:3-392(+)
KAKAIVLIPSVIPGDELRNPGPVASPPQFLPFYSQSYSICISPIIISINNNTCGGNSQVSTEFLKPTIPLFKWRLVISYDGTHYAGWQYQVSPPTVQCAIEKALIEITKLDRKDLNLVGAGRTDTGVHA*

Click here to download the sequence:
Link to NCBI Protein BLAST