Transcript Information: R_Transcript_113722.p1


Annotated TAIR IDAT5G55570.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22514587-22515260 | Reverse length=143
E-Value2.3E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4315626744212
Replicate 27.3487051457043
Replicate 36.7084017245875
Condition 2: 8 Hour
Replicate 16.8210623781612
Replicate 24.631896952817
Replicate 34.0192852088
Condition 3: 24 Hour
Replicate 19.0191385537409
Replicate 27.0891903576856
Replicate 34.533881685143


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113722.p1 GENE.R_Transcript_113722~~R_Transcript_113722.p1 ORF type:3prime_partial len:140 (+),score=17.13 R_Transcript_113722:18-434(+)
ATGCAAATTCTTTCTTCTTTTTCCTATCCTCCAACAAATTGCCTCAAAAATAACAACACATTGCCAATTATCCATTCCCATAATTTCCAAGCTCTTAAACCAATTGTAAAGTTAAGGAGCAACACCAACCAATATTCCTTGAGAATTAGACAATTGGATGTGAAAGTGAAAGTGCTAAATGATGTTTCAACAGTAGATACTGCTCAAGCTCAAGTCACCTGGGAAATCATTGTTGGTGCTCTAGCTGGTGTAACGCCTTTTATTATTGCGGGAATTGAGTTCAGCAAAAGGATTGTAGCACAAAGAAGGTGCGAGGTGTGTGGAGGGTCAGGATTAGTTCTTCGAGACAAGAAGTACTACTTCAGGTGCCCTAGCTGTGGGGGGTTTCTTCCATGGCAGTCTTGGAAAAGATTCTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113722.p1 GENE.R_Transcript_113722~~R_Transcript_113722.p1 ORF type:3prime_partial len:140 (+),score=17.13 R_Transcript_113722:18-434(+)
MQILSSFSYPPTNCLKNNNTLPIIHSHNFQALKPIVKLRSNTNQYSLRIRQLDVKVKVLNDVSTVDTAQAQVTWEIIVGALAGVTPFIIAGIEFSKRIVAQRRCEVCGGSGLVLRDKKYYFRCPSCGGFLPWQSWKRFF

Click here to download the sequence:
Link to NCBI Protein BLAST