Transcript Information: R_Transcript_113723.p1


Annotated TAIR IDAT5G55570.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22514587-22515260 | Reverse length=143
E-Value9E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8263106009517
Replicate 26.6573635466311
Replicate 39.8703828666348
Condition 2: 8 Hour
Replicate 15.9721621822549
Replicate 27.0900357057418
Replicate 34.8699443127867
Condition 3: 24 Hour
Replicate 18.3991977662332
Replicate 26.6345087719623
Replicate 38.3635944738551


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113723.p1 GENE.R_Transcript_113723~~R_Transcript_113723.p1 ORF type:complete len:123 (+),score=19.84 R_Transcript_113723:18-386(+)
ATGCAAATTCTTTCTTCTTTTTCCTATCCTCCAACAAATTGCCTCAAAAATAACAACACATTGCCAATTATCCATTCCCATAATTTCCAAGCTCTTAAACCAATTGTAAAGTTAAGGAGCAACACCAACCAATATTCCTTGAGAATTAGACAATTGGATGTGAAAGTGAAAGTGCTAAATGATGTTTCAACAGTAGATACTGCTCAAGCTCAAGTCACCTGGGAAATCATTGTTGGTGCTCTAGCTGGTGTAACGCCTTTTATTATTGCGGGAATTGAGTTCAGCAAAAGGATTGGGGGTTTCTTCCATGGCAGTCTTGGAAAAGATTCTTTTCTGGATGAAATTGCGTATGGAGACTTCTTGATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113723.p1 GENE.R_Transcript_113723~~R_Transcript_113723.p1 ORF type:complete len:123 (+),score=19.84 R_Transcript_113723:18-386(+)
MQILSSFSYPPTNCLKNNNTLPIIHSHNFQALKPIVKLRSNTNQYSLRIRQLDVKVKVLNDVSTVDTAQAQVTWEIIVGALAGVTPFIIAGIEFSKRIGGFFHGSLGKDSFLDEIAYGDFLI*

Click here to download the sequence:
Link to NCBI Protein BLAST