Transcript Information: R_Transcript_113725.p1


Annotated TAIR IDAT5G55570.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22514587-22515260 | Reverse length=143
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2259708481364
Replicate 21.5363146646072
Replicate 30.55870091697933
Condition 2: 8 Hour
Replicate 12.9860810911275
Replicate 23.4541199592075
Replicate 34.8699443127867
Condition 3: 24 Hour
Replicate 12.7997325887444
Replicate 21.434488383127
Replicate 33.2030787346679


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113725.p1 GENE.R_Transcript_113725~~R_Transcript_113725.p1 ORF type:complete len:123 (+),score=10.45 R_Transcript_113725:18-386(+)
ATGCAAATTCTTTCTTCTTTTTCCTATCCTCCAACAAATTGCCTCAAAAATAACAACACATTGCCAATTATCCATTCCCATAATTTCCAAGCTCTTAAACCAATTGTAAAGTTAAGGAGCAACACCAACCAATATTCCTTGAGAATTAGACAATTGGATGTGAAAGTGAAAGTGCTAAATGATGTTTCAACAGTAGATACTGCTCAAGCTCAAGTCACCTGGGAAATCATTGTTGGTGCTCTAGCTGGTGTAACGCCTTTTATTATTGCGGGAATTGAGTTCAGCAAAAGGATTGTAAGTTTCATTGTTCACTATTGGTTTTTTTCTACACAGATTTTCTTCAGAAATGTGACAATCTTGTTGTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113725.p1 GENE.R_Transcript_113725~~R_Transcript_113725.p1 ORF type:complete len:123 (+),score=10.45 R_Transcript_113725:18-386(+)
MQILSSFSYPPTNCLKNNNTLPIIHSHNFQALKPIVKLRSNTNQYSLRIRQLDVKVKVLNDVSTVDTAQAQVTWEIIVGALAGVTPFIIAGIEFSKRIVSFIVHYWFFSTQIFFRNVTILLC*

Click here to download the sequence:
Link to NCBI Protein BLAST