Transcript Information: R_Transcript_113854.p1


Annotated TAIR IDAT3G48200.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17832949-17837371 | Reverse length=1088
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0560767197745
Replicate 20.97969928749424
Replicate 31.7185292615595
Condition 2: 8 Hour
Replicate 10.60486583126772
Replicate 20.429623530343
Replicate 30.81375015590024
Condition 3: 24 Hour
Replicate 11.8273826430103
Replicate 20.86768173128529
Replicate 32.5432191173248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113854.p1 GENE.R_Transcript_113854~~R_Transcript_113854.p1 ORF type:complete len:1093 (+),score=167.30 R_Transcript_113854:205-3483(+)
ATGGGTTTGAGAAGAATTCAATGGGGAGGTTTTCTGCTTTGTTGGGGCTTTTGCATTTTATGTTTCAAAGCTCTTGGTGATGTTCCTCAAGTGTCTGTCAAGTTCCCGCAAGCTCCTTCTCTTTTCTCACATCTCAATTCAGCCACATTTGTCTTTGAAGCTCTAGTACCAAATTCAAGAAAGAACTGCTCCAACTGTAGCTTCAATTGCAAGTTAGATGATGCCATCTCTCCAGATTGCAGGCAAAGGAATGTTTCTTTTGTCGGTTTGCAAGATGGAAATCATAGCTTCAAGGTCTGCACCAATGCACCCCAAGGAGTTGGTTGTGCTAGCTATAATTGGGCTGTTGATACTGTTCACCCTACAGCGTACATTTCAGCTTCAACATCTTTCACAAATGCTGCCAATGTTACTGTAAATATTTCCTTCAGCGAACCCTGTACAGGTGGAGGTGGCTTTACATGCTCATCGGTTGATGCATGCAACCTTCTTGTATATGGTGCTGGGCAAGTTATACCAAATACACTTAAAACTATCCAGCCATATCTCCAATACTCAGTTGTTGTCGCTTTATCTACTAAAGCAAAATATGGACGGGTAATCCTTGCAATGGACAAAGGGTTTTGCACAGACGAGGCTGGAAATAGGTTCATAAGACCAGCAAATGCAACTTTTGTACATTTTGATCGAAGAAGTGTGTTCGTTAGCCTGAGAACCCATGTTCCCGAAAGGCTACTTCAGCTTGGTGGCGAAACTAGAACTGTACAGGCAACAAATAGTAACAAGAATCTCGAGGTGTATCTTTACTTCACAGAGCCAGTTTTGAACACTTCGACAGAAATTATGAAATCTATCGACATAAGTCAGGGCTCACTACGCCCAATCAATGGCAGTAGCCTTGCCAATAGAAGATTTGGATTTCTGATTGAAGATATACCAAGCGTTACTGCCATCACAGTGAGCCTCAACTCAAGTTTTGTCATTAGCAGACAGGGGGCTCCTGTTTCTCCAGTTGCTCCAGCTACCTTTCTTTATGATTCAAAGAGGCCGGTAGTGAGGCTGAGCACAACCTCTAAAATGAGAACTAGAGACAGGAGCATTGCAGTGTCAACAAAATTCATGAAGCCTGTTTTTGATTTCAATGCTACTCACATGCTCATCTCTGGAGGCCATATAGAGAGTTTCAAACAACTAAGCAGGAGTTCATACGTGGCATTGATTCAGGCCTATGACGGTATCCTTTCTATCAGGGTTCCTGAAAATGTGACTGCAGATGTTGCAGGCAATCCAAATTTGGCTTCTAATGTCATAGAAGTGAGGCATTCAGATTCGTTGCCTATGATGTCTACAGTGTTTTCCATCTTTGTAATGACATTGTTTGTGGCGACATGTGTGGTGGCGGGCTTTCTCACAATATCCACCGCAAGCCTACAGGCTGCAGGGGCATTTCCAAGATCATCAAGTTCTCTGACATCTAATCCTACAAGAAATCTTTTTAGAATTGCATGCTACATTCAGGTGTTTGCTCTTTCTAGGTGGTTGGCTGTGACTTTGCCAGTTGATTATTATGAATTCACTAGAGGCATAGAGTGGAGTGTTCCTTACTTGAGTCTTCCCTGGGAAGGCGACCACTCTCAGCCTATGGTTTTCAGCTCAAATACGTCGAGTAGCTCCTCTTTCTTAAGCACCAAAATCAAGAATTCTTCTGAGGTCCAAACAGTACAGTTGAACAAAGGCAGTTTCGAGAAGGCTGGAGTAGTATATGGTGCGCCACTAACTGCTATGGAATACCAAACATATTTTGAGAGTCACAATTATATCCCAGAAGCAGAATATATAACAGATCCTGAAAGTTCAACTGGATGGAGGGGTTTCGAAAGGAGCATGTTTTGGTTAGTGGTAATTGCTGGCAGCTTGGTTCTAGTGCATGCTTTCCTTCTCCTAGTAATGAAGTCAAGGAAGCGTAATGAGAAAGGGAAAACTTGTGGCGCTTTAGTCTTTCCTCGATTTGAGATCTTTCTTTTGATAGTTGCTGTTCCTTGTATCTGTCTTGCTTCAGCTGCTGTAATCAAAGGGAGAACAACTTTAGGGACTATAATCGGAGTTCTATTATTGATTTTCACATCTTCCCTGCTGCTATTCTTACTCATGTTCCTCACAATTGGGATCACATTGGGGAAGTTACTTCAATACAAAGAAATTCATCAAGTGGACCAGAAGTTCCATTGGTACCAAGAGTTAGTCCGGGTGACCCTTGGCCCTGGTAAACGAAGCCAATGGACATGGAGAAATGAAGCCAACTCGAAAAAATTAGCCAAGTATGGGCCTATGTTCGAGGATCTCAGAGGACCCCCAAAGTACATGCTCTCAATGATTGCTGCTGGAAGCCACATGCCAATTGGCCGAATCATTGCCTCTGACGATGAGACTGAAGATGCAGAGGCCCCTCTTATTCAGAAATTGTTTGGAATCTTGAGGATATACTACACCTTGCTTGAATCCCTACGGAGGTTTCTCTTGGGAATCCTTGCTGGTCTACACTTGGAAAACTCCTCTTCTTCAAAGGCTCCAACTGTCGTGTTGCTAAGCATTACTTCATTCCAGCTTTTCTTCTTAGTCCTTAAGAAGCCTTACATCAAGAAGAAGGTGCAGCTAGTTGAGATCATTTCAATCGCTTGTGAAGTGGGGATGTTTGCTACTTGCATGGTTCTCTTGGAGAGGGAATTCTCAATGCCGGTTGAGAGAGGAATCGGTATATTCATGCTCTGTCTCTTCATGCTTGGTTTTCTCGCGTTAATGTGCCATGAGTGGTATGCTTTGTGTAAGCAAATAAGGAAGCTAGACGCATCACAGAACTCGTTTCTAGTTGGTCTTAAAACTGCTTTAATAGGGTTTTTCCTGCTCTTTGCTCCTGAGAAAATGGTCAAAGACATTGATGATTGGTTGCCAGAGGATAAAGCAGGGAGATCAAGTGGAGAATCAAATATGTTGAACACAACACCAACCAGTCGGTTCAGGAGTTCAGAGAGTAGGAGCTCCAGCATCTCAGATAAACCATGGATTAAACAGTTGAGAGAAATGGCTAAGGCAAGCTTTAAACAAGGAAATGGAAATGAAAATGGAAATGCAGTAAATGACCCTTCAAGTAGTAATACCAGATGGAGTGGCTTTTGGCGCGGGAAATTAAGTGGGAGTTCATCAAAGAACTCATCAAATGATTATAAGTCCAGGCCAAAGAGTTTGTACAATGATTTGGAAGCCATTTTCGCATCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113854.p1 GENE.R_Transcript_113854~~R_Transcript_113854.p1 ORF type:complete len:1093 (+),score=167.30 R_Transcript_113854:205-3483(+)
MGLRRIQWGGFLLCWGFCILCFKALGDVPQVSVKFPQAPSLFSHLNSATFVFEALVPNSRKNCSNCSFNCKLDDAISPDCRQRNVSFVGLQDGNHSFKVCTNAPQGVGCASYNWAVDTVHPTAYISASTSFTNAANVTVNISFSEPCTGGGGFTCSSVDACNLLVYGAGQVIPNTLKTIQPYLQYSVVVALSTKAKYGRVILAMDKGFCTDEAGNRFIRPANATFVHFDRRSVFVSLRTHVPERLLQLGGETRTVQATNSNKNLEVYLYFTEPVLNTSTEIMKSIDISQGSLRPINGSSLANRRFGFLIEDIPSVTAITVSLNSSFVISRQGAPVSPVAPATFLYDSKRPVVRLSTTSKMRTRDRSIAVSTKFMKPVFDFNATHMLISGGHIESFKQLSRSSYVALIQAYDGILSIRVPENVTADVAGNPNLASNVIEVRHSDSLPMMSTVFSIFVMTLFVATCVVAGFLTISTASLQAAGAFPRSSSSLTSNPTRNLFRIACYIQVFALSRWLAVTLPVDYYEFTRGIEWSVPYLSLPWEGDHSQPMVFSSNTSSSSSFLSTKIKNSSEVQTVQLNKGSFEKAGVVYGAPLTAMEYQTYFESHNYIPEAEYITDPESSTGWRGFERSMFWLVVIAGSLVLVHAFLLLVMKSRKRNEKGKTCGALVFPRFEIFLLIVAVPCICLASAAVIKGRTTLGTIIGVLLLIFTSSLLLFLLMFLTIGITLGKLLQYKEIHQVDQKFHWYQELVRVTLGPGKRSQWTWRNEANSKKLAKYGPMFEDLRGPPKYMLSMIAAGSHMPIGRIIASDDETEDAEAPLIQKLFGILRIYYTLLESLRRFLLGILAGLHLENSSSSKAPTVVLLSITSFQLFFLVLKKPYIKKKVQLVEIISIACEVGMFATCMVLLEREFSMPVERGIGIFMLCLFMLGFLALMCHEWYALCKQIRKLDASQNSFLVGLKTALIGFFLLFAPEKMVKDIDDWLPEDKAGRSSGESNMLNTTPTSRFRSSESRSSSISDKPWIKQLREMAKASFKQGNGNENGNAVNDPSSSNTRWSGFWRGKLSGSSSKNSSNDYKSRPKSLYNDLEAIFASK*

Click here to download the sequence:
Link to NCBI Protein BLAST