Transcript Information: R_Transcript_113866.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22959699314112
Replicate 20.13205220387609
Replicate 30
Condition 2: 8 Hour
Replicate 11.3859923555044
Replicate 20.28126895397718
Replicate 30.11416107308419
Condition 3: 24 Hour
Replicate 10.28877744940508
Replicate 20.27742464013305
Replicate 30.6882926002169


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113866.p1 GENE.R_Transcript_113866~~R_Transcript_113866.p1 ORF type:5prime_partial len:159 (+),score=28.80,zf-RVT|PF13966.2|2.6e-17,zf-RVT|PF13966.2|4e+03 R_Transcript_113866:2-478(+)
GCTAGATTTATTTGGAAGGCTAAGGTCCCTCTTAAGGTGAGGGCTTTTGTTTGGACTTTGGCTCTAGGGAGGATCAATACCAATGATATGTGGCAACGACGGAGGCCTTCTTGGTGCCTTTCACCTGATATGTGCTTCATGTGTGGAGCAAGTGGGGAGACTGTTTCTCATTTGTTTCTTCATTGTCCTGCTGTGAGGTCTTTGTGGGCTTTGCTTTTTGGTGTGCGTGGGGAAGCTCTGGTGTGTCCTTCTACTGTGATGGAGTTCCTTCAAGTCCATTTTTGGGGGTTTGGTCAGGATAAGGAGTTGGCTATTTTATGGCGTAATGCGATTCTTGCTGTCCTGTGGTGTGTTTGGCTGGAGAGGAATGCTCGGGTGTTTAATCAAGTTTCTCTTTCTCCTCCCCTCCTGTGGGAGCGTGTTACGTTCTTGGCCTCCCTTTGGAGTAAGGCGGGGGCGGTGGGGGGCTTTCCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113866.p1 GENE.R_Transcript_113866~~R_Transcript_113866.p1 ORF type:5prime_partial len:159 (+),score=28.80,zf-RVT|PF13966.2|2.6e-17,zf-RVT|PF13966.2|4e+03 R_Transcript_113866:2-478(+)
ARFIWKAKVPLKVRAFVWTLALGRINTNDMWQRRRPSWCLSPDMCFMCGASGETVSHLFLHCPAVRSLWALLFGVRGEALVCPSTVMEFLQVHFWGFGQDKELAILWRNAILAVLWCVWLERNARVFNQVSLSPPLLWERVTFLASLWSKAGAVGGFP*

Click here to download the sequence:
Link to NCBI Protein BLAST