Transcript Information: R_Transcript_113871.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4923804554173
Replicate 20.13205220387609
Replicate 30.14406753205127
Condition 2: 8 Hour
Replicate 10.30799830122321
Replicate 20.28126895397718
Replicate 30.45664429233678
Condition 3: 24 Hour
Replicate 10.57755489881017
Replicate 20
Replicate 30.55063408017352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113871.p1 GENE.R_Transcript_113871~~R_Transcript_113871.p1 ORF type:5prime_partial len:159 (+),score=25.02,zf-RVT|PF13966.2|2.6e-17,zf-RVT|PF13966.2|1.1e+04 R_Transcript_113871:2-478(+)
GCTAGATTTATTTGGAAGGCTAAGGTCCCTCTTAAGGTGAGGGCTTTTGTTTGGACTTTGGCTCTAGGGAGGATCAATACCAATGATATGTGGCAACGACGGAGGCCTTCTTGGTGCCTTTCACCTGATATGTGCTTCATGTGTGGAGCAAGTGGGGAGACTGTCTCTCATTTGTTTCTCCATTGTCCTGCTGTGAGGTCTTTATGGGCTTTGCCTTTTGGTATGCATGGGGAAGCTCTGGTGTGTCCTTCTAATGTGATGGAGTTCCTCCAGGTCCATTTTTGGGGGTTTGGTCGAGATAAGGAGCTGGGTATTTTATGGTGTAATGCGATTCTTGGTGTCCTGTGGTGTGTGTGGCTGGAGAGGAATGCTCGGGTGTTTAATCAAGTTTCTCTTTCTCCTCCCCTCCTGTGGGAGCGTGTTACGTTCTTGGCCTCCCTTTGGAGTAAGGCGGGGGCGGTGGGGGGCTTTCCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113871.p1 GENE.R_Transcript_113871~~R_Transcript_113871.p1 ORF type:5prime_partial len:159 (+),score=25.02,zf-RVT|PF13966.2|2.6e-17,zf-RVT|PF13966.2|1.1e+04 R_Transcript_113871:2-478(+)
ARFIWKAKVPLKVRAFVWTLALGRINTNDMWQRRRPSWCLSPDMCFMCGASGETVSHLFLHCPAVRSLWALPFGMHGEALVCPSNVMEFLQVHFWGFGRDKELGILWCNAILGVLWCVWLERNARVFNQVSLSPPLLWERVTFLASLWSKAGAVGGFP*

Click here to download the sequence:
Link to NCBI Protein BLAST