Transcript Information: R_Transcript_113876.p1


Annotated TAIR IDAT1G53520.1
Annotated Gene NameChalcone-flavanone isomerase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19976485-19977915 | Reverse length=287
E-Value3.9E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60174596554018
Replicate 20.34609286400491
Replicate 30.25172239116651
Condition 2: 8 Hour
Replicate 10.26907543898072
Replicate 20.49144795255353
Replicate 30.4986706214392
Condition 3: 24 Hour
Replicate 10.25228359590884
Replicate 20
Replicate 30.36078634099281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113876.p1 GENE.R_Transcript_113876~~R_Transcript_113876.p1 ORF type:complete len:182 (+),score=26.31,Chalcone|PF02431.11|2.9e-07 R_Transcript_113876:71-616(+)
ATGCTTGCAATTGCCCAAATGGCCGCGCGAATTGGTTATTTTCCGCCCTTGGTTGCTCTCTCTTCTGTCAATTCTGCACCCAAAATCTCTCCTTCAGGGAAGATTCCAAATTTTAATTCCCACCAAAAACCCAGAATTCAAATTCCTCACTTATCCACATCTCCCATTCATTTCTCTCTCCTAAATGACAAGAAAATCAGGACCATTTTATCTGCTAAGGCTGCTGCTTCACCTTCTGTAGGAAATGCAGATTACACAGAAGAACCGGCAACCAGTGTAAAATTCCCTAAATCTGTAGATCTCCCAGATTGTTCAAGTTCATTATCTTTGCTTGGAACCGGCTACAGGGAAAAAGTTTTTGCAATTATTGGCGTTAAGGTGTATGCAGCTGGTCTTTATGTTAATCCATCCATTCTAAATGAACTGAGTCCTTGGAAAGGAAAATCTGCGGATGAAATTCAAAAGGACTTGGCATTGTTTCAATCTATGTATCAATGTAATCAATCATGTAAATTCAACAGGACTTGGCATAGTAACAAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113876.p1 GENE.R_Transcript_113876~~R_Transcript_113876.p1 ORF type:complete len:182 (+),score=26.31,Chalcone|PF02431.11|2.9e-07 R_Transcript_113876:71-616(+)
MLAIAQMAARIGYFPPLVALSSVNSAPKISPSGKIPNFNSHQKPRIQIPHLSTSPIHFSLLNDKKIRTILSAKAAASPSVGNADYTEEPATSVKFPKSVDLPDCSSSLSLLGTGYREKVFAIIGVKVYAAGLYVNPSILNELSPWKGKSADEIQKDLALFQSMYQCNQSCKFNRTWHSNKN*

Click here to download the sequence:
Link to NCBI Protein BLAST