Transcript Information: R_Transcript_113877.p1


Annotated TAIR IDAT1G53520.1
Annotated Gene NameChalcone-flavanone isomerase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19976485-19977915 | Reverse length=287
E-Value6.7E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3894987577987
Replicate 20.94447026094074
Replicate 32.2193378985892
Condition 2: 8 Hour
Replicate 10.76253558659241
Replicate 21.0832261099536
Replicate 31.7586335549164
Condition 3: 24 Hour
Replicate 12.6214797180423
Replicate 21.3736839447418
Replicate 31.5147200475361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113877.p1 GENE.R_Transcript_113877~~R_Transcript_113877.p1 ORF type:complete len:289 (+),score=55.83,Chalcone|PF02431.11|1.3e-23,Chalcone_3|PF16036.1|1e-14,Chalcone_2|PF16035.1|0.00043,Chalcone_2|PF16035.1|0.79 R_Transcript_113877:71-937(+)
ATGCTTGCAATTGCCCAAATGGCCGCGCGAATTGGTTATTTTCCGCCCTTGGTTGCTCTCTCTTCTGTCAATTCTGCACCCAAAATCTCTCCTTCAGGGAAGATTCCAAATTTTAATTCCCACCAAAAACCCAGAATTCAAATTCCTCACTTATCCACATCTCCCATTCATTTCTCTCTCCTAAATGACAAGAAAATCAGGACCATTTTATCTGCTAAGGCTGCTGCTTCACCTTCTGTAGGAAATGCAGATTACACAGAAGAACCGGCAACCAGTGTAAAATTCCCTAAATCTGTAGATCTCCCAGATTGTTCAAGTTCATTATCTTTGCTTGGAACCGGCTACAGGGAAAAAGTTTTTGCAATTATTGGCGTTAAGGTGTATGCAGCTGGTCTTTATGTTAATCCATCCATTCTAAATGAACTGAGTCCTTGGAAAGGAAAATCTGCGGATGAAATTCAAAAGGACTTGGCGTTGTTTCAATCTATTTATCGATCCTCTTTGGAGAAATCATTACAAATTGTTTTGGTAAGAGATGTGGATGGAAAAACCTTTTGGGATGCCTTGGATGAAGCTGTTTCTCCAAGAGTGACAGTTCCGACCCCAGTTGATGAATCAGCTCTCACTACTTTTCGTATTATCTTCCAAGGAAGATCTCTTAAAAAGGGCACTTTAATACTTTTAACATGGCTTGAACCATCTAAAATGCTGGTGTCAGTGTCATCAAATGGGCTACCAACAAAAGCAGATGCTACAATTGAGTCATTGAATGTTACGAAAGCCCTTTTTGATGTGTTTTTAGGAGATTCTCCTGTTTCTCCTACCTTAAAGGCTTCAGTGGCCAGTGGGTTGAGATCCAACTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113877.p1 GENE.R_Transcript_113877~~R_Transcript_113877.p1 ORF type:complete len:289 (+),score=55.83,Chalcone|PF02431.11|1.3e-23,Chalcone_3|PF16036.1|1e-14,Chalcone_2|PF16035.1|0.00043,Chalcone_2|PF16035.1|0.79 R_Transcript_113877:71-937(+)
MLAIAQMAARIGYFPPLVALSSVNSAPKISPSGKIPNFNSHQKPRIQIPHLSTSPIHFSLLNDKKIRTILSAKAAASPSVGNADYTEEPATSVKFPKSVDLPDCSSSLSLLGTGYREKVFAIIGVKVYAAGLYVNPSILNELSPWKGKSADEIQKDLALFQSIYRSSLEKSLQIVLVRDVDGKTFWDALDEAVSPRVTVPTPVDESALTTFRIIFQGRSLKKGTLILLTWLEPSKMLVSVSSNGLPTKADATIESLNVTKALFDVFLGDSPVSPTLKASVASGLRSNL*

Click here to download the sequence:
Link to NCBI Protein BLAST