Transcript Information: R_Transcript_113945.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54896123172086
Replicate 20.39466730105823
Replicate 30.25834666461826
Condition 2: 8 Hour
Replicate 10.27615637158547
Replicate 20.2521903967051
Replicate 30.13647827534126
Condition 3: 24 Hour
Replicate 10.086307545968812
Replicate 20.082914507107433
Replicate 30.57599222860256


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113945.p1 GENE.R_Transcript_113945~~R_Transcript_113945.p1 ORF type:complete len:266 (+),score=40.56,RVT_1|PF00078.23|2.5e-21 R_Transcript_113945:176-973(+)
ATGTTTGTTAGTTGGATCATGGCATGCATATCCTCAGTTTCTTATTCTGTTTTGGTGAATGGAGAATTGACTGAGAAATTTGAAGCAAAGAAGGGGCTTAGACAAGGGGATCCTCTATCCCCATATCTTTATGTGATTGCAATGGAATATTTAAATAGATGTCTAAATGAGTTAAGTGAAAACAAAGAGTTTAAATTTCATCCTAAGTGCAGGAAGCTCAAGTTTACCCACTTGGTTTTTGCTGATGATTTACTGCTCTTTGCTAGAGGGGACCTTCAGTCCATTCAACTCCTGAACAGAGCCTTTGATAAGTTCTCGAAGGCGTCAGGTCTCAGTGCAAACCTATCTAAGAGCTCTCTTTTCTGTGAAGGAATTGGTGATAAGGAAAAACATGAGATCTTGGAGTACCTACAGCTAAAGGAGGGTAAGATGCCAGTTAGGTATCTCGGGCTCCCACTGTCACACAAAAAACTCACAGCTGCACAATGTATGAGTCTAGTGGAAAGAATTACTGCTAAAGTCACATCCTGGACAACAAGGTTTTTATCTTATGCAGGGAGGGTGCAGCTAGTTCAGTCAGTAGCCTTTGGCATCCAAGCATATTGGGCCCAAATAATCATCATCCCTAAACAAGTGCTGAAGAAGGTGGAAGCTATCTGTAGAAGCTTCATCTGGACTGGAAAGGTAATAATTAGTAAAAAGGCACTTGTTGCATGGGACAATGTTACCAAGCCCAAAAAAAGCTGGGGGACTAGGGCTGAAAAACCTAGTGATGTGGAATGCTGCTGCAATATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113945.p1 GENE.R_Transcript_113945~~R_Transcript_113945.p1 ORF type:complete len:266 (+),score=40.56,RVT_1|PF00078.23|2.5e-21 R_Transcript_113945:176-973(+)
MFVSWIMACISSVSYSVLVNGELTEKFEAKKGLRQGDPLSPYLYVIAMEYLNRCLNELSENKEFKFHPKCRKLKFTHLVFADDLLLFARGDLQSIQLLNRAFDKFSKASGLSANLSKSSLFCEGIGDKEKHEILEYLQLKEGKMPVRYLGLPLSHKKLTAAQCMSLVERITAKVTSWTTRFLSYAGRVQLVQSVAFGIQAYWAQIIIIPKQVLKKVEAICRSFIWTGKVIISKKALVAWDNVTKPKKSWGTRAEKPSDVECCCNM*

Click here to download the sequence:
Link to NCBI Protein BLAST