Transcript Information: R_Transcript_113954.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2168640636479
Replicate 21.3997533610865
Replicate 31.4507600477563
Condition 2: 8 Hour
Replicate 10.89781504806566
Replicate 21.7888705472949
Replicate 31.3311181121617
Condition 3: 24 Hour
Replicate 11.5305204818469
Replicate 21.6173856519757
Replicate 31.2403032655908


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113954.p1 GENE.R_Transcript_113954~~R_Transcript_113954.p1 ORF type:complete len:300 (+),score=32.27,zf-RVT|PF13966.2|4.4e+03,zf-RVT|PF13966.2|2.7e-15 R_Transcript_113954:1916-2815(+)
ATGAAGGAAGAGGATCAAGGTCTTATTTTGAAGGAGCTGAACATCAAGGCTGGACACTTGCCGGTCAGGTACCTTGGTTTACCTTTCTCCCATAAGAAGTTGACTGTGACACAATGTATGCCGTTAGTGGAGAAAATTACTTCCAGAATCACTTCATGGACTGCCAAGTATCTTTCATATGCTGGGAGACTCCAGTTGATACAGGCTGTCATCTTCGGGATTCAAGCTTTTTGGGCTCAAATTGTCCTTATCCCCAAGAAAGTAATTAAACTGATTGAAGGGTTGTGTAGGAGCTTTTTATGGACAGGTAAAGCAGTGATCACCAAGAGGGCGCTAGTTGCATGGAGTGCTATTACTACTCCAAAAAAACAAGGGGGATTGGGGCTGTTAAATCTGGCTAGGTGGAACAACGCTGCTATTTGTAGGTTATGCTGGGATTTCACTATGAAGAAGGATAAAGTGTGGATCAAATGGTTACATGAATATTATCCGGGGTTAGATCTTAACAGACAAATTCCAGAGAATATGTCATGGATGTTACGGAAAGTAGTGGAGGCTAGAGAGGAGATGGCCGAGGTAGTAGGGGTCAGGGCTATCACTACCAGAAAAATTAAGGATTTTTATGAGATGATGACCACTAATACCACAACAGTTCCTTGGTATCAGCTGGTATGGACAAGTTTTGCTAGGCCACGCACCAAATTTATCTTGTGGCTGCTAATGAATCAGAAATTGGCCACTAGAGATAAGATTGCAAGATGGAATCCCAGTTGTGAACTTATATGCCCTCTGTGCAATCAGGAGGATGAAAATTGTGAGCACTTGTTTACTAATACCCTTTTACCCAGGAAGTGTTTGATAGAGTGTGGCATGGTTTGCGATGTACTTGGATCCAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113954.p1 GENE.R_Transcript_113954~~R_Transcript_113954.p1 ORF type:complete len:300 (+),score=32.27,zf-RVT|PF13966.2|4.4e+03,zf-RVT|PF13966.2|2.7e-15 R_Transcript_113954:1916-2815(+)
MKEEDQGLILKELNIKAGHLPVRYLGLPFSHKKLTVTQCMPLVEKITSRITSWTAKYLSYAGRLQLIQAVIFGIQAFWAQIVLIPKKVIKLIEGLCRSFLWTGKAVITKRALVAWSAITTPKKQGGLGLLNLARWNNAAICRLCWDFTMKKDKVWIKWLHEYYPGLDLNRQIPENMSWMLRKVVEAREEMAEVVGVRAITTRKIKDFYEMMTTNTTTVPWYQLVWTSFARPRTKFILWLLMNQKLATRDKIARWNPSCELICPLCNQEDENCEHLFTNTLLPRKCLIECGMVCDVLGSR*

Click here to download the sequence:
Link to NCBI Protein BLAST