Transcript Information: R_Transcript_113954.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.132942404086
Replicate 20.14480207183654
Replicate 31.1058425046418
Condition 2: 8 Hour
Replicate 10.33773606823787
Replicate 21.0794908475055
Replicate 30.87628465063937
Condition 3: 24 Hour
Replicate 10.15832970501865
Replicate 20.7605261686406
Replicate 30.60379874998337


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_113954.p3 GENE.R_Transcript_113954~~R_Transcript_113954.p3 ORF type:complete len:145 (+),score=18.47,RVT_1|PF00078.23|6.2e-24 R_Transcript_113954:1459-1893(+)
ATGCTTAAAGTGGATCTGCAGAAGGCATATGATAGTGTGAAATGGGCTTTTATCAAGCAAATGCTCACTGAACTAGGATTCCCAAGCAGGTTTGTGGATTGGATTATGTTGGGAGTATCTACTGTATCTTATACAGTGATGGTTAATGGGGAGCCAACCACCAAGTTTGCTGCAAAAAAAGGGCTACGGCAGGGAGACCCACTATGCCCTTATTTGTTCGTGATTGCTATGGAGTACCTAAATCGATGCCTTAAAGAAATGAGCATGAACCCGGATTTCAATTTCCATCCGAAATGTAAAAAGCTTAATTTGACACATCTGGTTTTTGCTGATGATTTAATGTTGTTTGCTAGAGTGGACGTGATTTCTGTTCAGCTGCTGCACAAAGCGTTTGAAAATTTTTCTAGTGTCTGGGTTAAAGGCAAATTTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_113954.p3 GENE.R_Transcript_113954~~R_Transcript_113954.p3 ORF type:complete len:145 (+),score=18.47,RVT_1|PF00078.23|6.2e-24 R_Transcript_113954:1459-1893(+)
MLKVDLQKAYDSVKWAFIKQMLTELGFPSRFVDWIMLGVSTVSYTVMVNGEPTTKFAAKKGLRQGDPLCPYLFVIAMEYLNRCLKEMSMNPDFNFHPKCKKLNLTHLVFADDLMLFARVDVISVQLLHKAFENFSSVWVKGKFG*

Click here to download the sequence:
Link to NCBI Protein BLAST