Transcript Information: R_Transcript_114081.p1


Annotated TAIR IDAT3G18930.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6524110-6525345 | Reverse length=411
E-Value6.1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.856931492057
Replicate 218.560534706751
Replicate 323.331920660582
Condition 2: 8 Hour
Replicate 114.089314401199
Replicate 217.380267788393
Replicate 324.974257767725
Condition 3: 24 Hour
Replicate 127.911580016977
Replicate 221.287674474432
Replicate 327.219976130341


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114081.p1 GENE.R_Transcript_114081~~R_Transcript_114081.p1 ORF type:complete len:431 (+),score=78.55,zf-RING_2|PF13639.2|1e-14,zf-RING_11|PF17123.1|1.1e-11,zf-rbx1|PF12678.3|9.6e-10,zf-C3HC4|PF00097.21|1.2e-07,zf-C3HC4_2|PF13923.2|5.9e-06,zf-ANAPC11|PF12861.3|1.3e-05,zf-RING_5|PF14634.2|1.7e-05 R_Transcript_114081:833-2125(+)
ATGAAGAAAAGAACCAACCTTAAACCTCACAAATCAATGGCGGAACCCTCGGTTCAAAAAGACGACGATTTCCCTTGCATTTTAAGAGGGTGTGACAAACCAGGCTCACCATGCGTCTACACGTGCGTTTGGTCGGACCCATTTCTCTCTCCCCCACCTCCACCGCCGCCACCACCACCGCCAACACCAACCGCCGAGAGCCACGTGGCACCCTTCTTAATTGCTACGGTTTGTTTTCTTGGCATCTCCTTTCTTCTCCTTACTACTTGCACCATCATTTTAAGGTACCGGTTCAGCCGCCTCCGTCGTAGAAATTCAACGGTTCGACCGGACCAAACCCCGGTCCAAGACGACGACTTTTCTGATGGGTCAGTTGTTGACCACCCTATTTGGCATATCGCCACTGTTGGTCTCCAACAATCGGCGATTGATTCTATTACTGCTTTTAAGTATTACAAGATCGATGGGTTTTTAAGTGATGGGAATAATAATGATTGTTCTGTTTGTTTGACTGAGTTTGAAGATGGTGATGATCTTAGACTCTTGCCAAAGTGTAGCCATGCTTTTCATATTTCTTGTATTGATACTTGGTTAAGGTCTCACAAGAACTGCCCTTTATGTCGTTCTCCTGTTGTTAATGATCCTGAACCTTCTGGGGGTTTCCCTCAAGGTGTTAATTTTAGTGCTATACAGTTGAGTTCTGGTAATTTGGATGGTGGGCAACAAGTTGAAGTCGAAAATTCTGGCCATTATGATGGTGGGTTGAATTCTGTTGTTTCTTTGGATGAGGAAAATAATGGTGATCAGAGTAGTAGTACTAGTAATCAATTGAGAGAAAGAAGGGATAATTTAACTTTGCCTATTGAGGGTATAAGGATAGCTGAGATATTGAAGAAGAATCGCGAGCTTCGGATTTTAAGTGATTTGGGGGAAAATTATCGGTTTCGAGGGGAGGATGATGATGGTGTTGAGCCTATTAGAAGGTCATTTTCGTTCAATTCTGTGGCTGCCTCGGTAATTTATGGTGCTATGAGTAATGTAAGCACAATGGGGAGTAATGAAGGATGTTCTAGCAACACTAGTGGTGGTGGTGTTGGACAAGAAAAGAAGATCAATGTTGTTGAGATGGTATCTAAACGAGGTTCGAGTATGTCTGGTTTGTTGATCAAGAGTTCTTCCATTGGTCGTTCCCTGCAAAAGGCTCCTGTTTCTATGAAGAGATCGCTTTCGTCTAGTAGCAAGTTCTTTTCATTCCGCAAAACAAAAAGCCAAGCTTCCATCCTTCCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114081.p1 GENE.R_Transcript_114081~~R_Transcript_114081.p1 ORF type:complete len:431 (+),score=78.55,zf-RING_2|PF13639.2|1e-14,zf-RING_11|PF17123.1|1.1e-11,zf-rbx1|PF12678.3|9.6e-10,zf-C3HC4|PF00097.21|1.2e-07,zf-C3HC4_2|PF13923.2|5.9e-06,zf-ANAPC11|PF12861.3|1.3e-05,zf-RING_5|PF14634.2|1.7e-05 R_Transcript_114081:833-2125(+)
MKKRTNLKPHKSMAEPSVQKDDDFPCILRGCDKPGSPCVYTCVWSDPFLSPPPPPPPPPPPTPTAESHVAPFLIATVCFLGISFLLLTTCTIILRYRFSRLRRRNSTVRPDQTPVQDDDFSDGSVVDHPIWHIATVGLQQSAIDSITAFKYYKIDGFLSDGNNNDCSVCLTEFEDGDDLRLLPKCSHAFHISCIDTWLRSHKNCPLCRSPVVNDPEPSGGFPQGVNFSAIQLSSGNLDGGQQVEVENSGHYDGGLNSVVSLDEENNGDQSSSTSNQLRERRDNLTLPIEGIRIAEILKKNRELRILSDLGENYRFRGEDDDGVEPIRRSFSFNSVAASVIYGAMSNVSTMGSNEGCSSNTSGGGVGQEKKINVVEMVSKRGSSMSGLLIKSSSIGRSLQKAPVSMKRSLSSSSKFFSFRKTKSQASILPL*

Click here to download the sequence:
Link to NCBI Protein BLAST