Transcript Information: R_Transcript_114119.p1


Annotated TAIR IDAT2G30105.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12849855-12851908 | Forward length=367
E-Value2.5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3689720716039
Replicate 20
Replicate 30.28633421995191
Condition 2: 8 Hour
Replicate 10.61214662368113
Replicate 20
Replicate 30.45379026550967
Condition 3: 24 Hour
Replicate 11.1478903613852
Replicate 20.82707220839665
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114119.p1 GENE.R_Transcript_114119~~R_Transcript_114119.p1 ORF type:complete len:80 (+),score=12.22,ubiquitin|PF00240.19|1.5e-08 R_Transcript_114119:749-988(+)
ATGGAAGAGGAAAAGGTGAAGGTACAGATCAAATTCGGAGGGGAGACAATATCTGTGAGTGTCTCCCCGGATTCAACCATCTCTGACCTCAAATCCCATCTCCAACCCCTCACCAATGTCCTTCCTCGTGGCCAAAAGCTTATTCACAAAGGGCCTTCACCAAGGCGAGGGTCCCAAGCTCAAGGATGCTCCTGTTGTTTCCAATTATCGGAGAATTATGAATGTAGACAGAAAGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114119.p1 GENE.R_Transcript_114119~~R_Transcript_114119.p1 ORF type:complete len:80 (+),score=12.22,ubiquitin|PF00240.19|1.5e-08 R_Transcript_114119:749-988(+)
MEEEKVKVQIKFGGETISVSVSPDSTISDLKSHLQPLTNVLPRGQKLIHKGPSPRRGSQAQGCSCCFQLSENYECRQKA*

Click here to download the sequence:
Link to NCBI Protein BLAST