Transcript Information: R_Transcript_114256.p1


Annotated TAIR IDAT5G43540.1
Annotated Gene NameC2H2 and C2HC zinc fingers superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17496993-17497406 | Forward length=137
E-Value4.6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2707617895739
Replicate 23.2768792557228
Replicate 33.9722666351709
Condition 2: 8 Hour
Replicate 13.2553462068592
Replicate 22.068058436179
Replicate 32.7279877232952
Condition 3: 24 Hour
Replicate 11.9905613203212
Replicate 22.2947668209849
Replicate 33.0364445808413


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114256.p1 GENE.R_Transcript_114256~~R_Transcript_114256.p1 ORF type:5prime_partial len:173 (+),score=30.79 R_Transcript_114256:2-520(+)
TATCACATAAAATTAAACATGAGCTTCAACCTCCAAGAGATGAATCATGAGCATGATAGTAGAGGAGCAAGCATAGCAACAAGATCCTATGATTGTGTGTTTTGTCAAAGAGGTTTCACCACAGCACAAGCCTTAGGTGGTCATATGAACATCCATAGGAAAGATAGAGCCACCACCACTAATATTACCACCACCACCAACAACAAATTACCTACTATTAATAAGCGCCCTAAAGCCATAATTAGCCATAAACAGGTGCTAATAGAAGATCATGATGATAATTACAATGATGATAATCAACTTAGATTATTCTACTCACCTAAGAGCTGTTTTAGTTCTAATGGTGGAACTTCAAGAACTTTTGAGGGTGTTTTTAATCTATTTGGCTCGAGCTCGAAAAATATTGGTTCTCATGATAATAATATGTATGGAAAGAGGGTCCAAGAACATGATGATCATATTCAAGATGATGGTGAAGAGCTGGATCTTGAGCTTCGTCTTGGTCATCATCCATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114256.p1 GENE.R_Transcript_114256~~R_Transcript_114256.p1 ORF type:5prime_partial len:173 (+),score=30.79 R_Transcript_114256:2-520(+)
YHIKLNMSFNLQEMNHEHDSRGASIATRSYDCVFCQRGFTTAQALGGHMNIHRKDRATTTNITTTTNNKLPTINKRPKAIISHKQVLIEDHDDNYNDDNQLRLFYSPKSCFSSNGGTSRTFEGVFNLFGSSSKNIGSHDNNMYGKRVQEHDDHIQDDGEELDLELRLGHHPW*

Click here to download the sequence:
Link to NCBI Protein BLAST