Transcript Information: R_Transcript_114352.p4


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97090217844249
Replicate 20.44672979609145
Replicate 30.97475479132564
Condition 2: 8 Hour
Replicate 11.0419516998828
Replicate 20.95152688685896
Replicate 31.1586134438545
Condition 3: 24 Hour
Replicate 10.73269597535226
Replicate 21.4077824823773
Replicate 31.3970875332062


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114352.p4 GENE.R_Transcript_114352~~R_Transcript_114352.p4 ORF type:complete len:94 (-),score=7.91,gag_pre-integrs|PF13976.2|2.2e-07 R_Transcript_114352:38-319(-)
ATGCTGTATAGTCTCTGGCATCATAGATTGGACCATGCTCCCTTTAATAAAATGAGATCTATTCCTTCAATTTCTGATATATTCAAGTCTTGCGATTCCAGTTCTTTGCCTGTGTGTATATCATGTCCTATGGCCAAGATGTCCAAATTACCTTTTCATTTAAGTCAGTCAGAAGCACATTATGCTTTTGAGTTTCTTCATATGGATATTTGGGGTCCTTATAGAGTTCCAACACAACAATTTCAGAGACTCCCTCCGTTTCAAAATGATCCGCTAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114352.p4 GENE.R_Transcript_114352~~R_Transcript_114352.p4 ORF type:complete len:94 (-),score=7.91,gag_pre-integrs|PF13976.2|2.2e-07 R_Transcript_114352:38-319(-)
MLYSLWHHRLDHAPFNKMRSIPSISDIFKSCDSSSLPVCISCPMAKMSKLPFHLSQSEAHYAFEFLHMDIWGPYRVPTQQFQRLPPFQNDPLG*

Click here to download the sequence:
Link to NCBI Protein BLAST