Transcript Information: R_Transcript_114578.p1


Annotated TAIR IDAT1G30700.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10892623-10894437 | Forward length=527
E-Value2E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17122852677973
Replicate 20.1575707348315
Replicate 30.17190797445518
Condition 2: 8 Hour
Replicate 10.36751767275415
Replicate 20.041952873998472
Replicate 30.3746111009836
Condition 3: 24 Hour
Replicate 10.12921842717282
Replicate 20.28965630813141
Replicate 30.28745578388045


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_114578.p1 GENE.R_Transcript_114578~~R_Transcript_114578.p1 ORF type:complete len:533 (+),score=73.47,FAD_binding_4|PF01565.19|3.1e-23,BBE|PF08031.8|1.3e-16 R_Transcript_114578:172-1770(+)
ATGAAGCTAAAGCTTAAAAACTCTGTACAACAAGCTTCTATGATCCAAATTTTGTTTGTGATCATATACGTTGGAAACTCTGTTACAACTTCAGCATCTTCTATCAATGAGTTTGTTGATTGTCTTCTCCAGAATTCTAACTCTTCGAATCCGATTCCTGCAGCCATATATACTCCCAAAAACTCTTCATTCTCATCTGTTCTGAGTGCATATGTGAGAAATCTCCGTTTCAACACATCCTCAACCCCGAAACCACTAGCCATAGTTGCAGCTTTGGACAAGTTTCATGTCCAAGCGACTGTCTTCTGTGCCAAGGCTCATGGTTTAGAGATTAGAATTCGGAGTGGAGGACATGATTTTGAGGGCCTTTCTTATGTGTCCCCTTACCCATTTGTTATCCTTGACATGTTCAACCTACGATCAATCGATATTGATCTGCCAAGTCAAACAGCTTGGGTGGAGTCAGGAGCTACTGTTGGTGAACTTTACCATAACATAGCTAAAAACAGCACCATCCATGCCTTTCCTGCAGGAGTCTGCCTTACTGTTGGCGTTGGTGGGCATTTTTCAGGGGGTGGTTATGGTACCATGCTTAGGAAGTTCGGGTTGACAGTTGATAATATCATTGATGCTGAGATACTTGACGTGAATGGTAAGATTCCGAGTAGGGAAACAATGGGGGAAGACCTCTTTTGGGCCATAAGAGGTGGCGGCGCTGCTAGTTTCTGTGTCGTTCTGGCATGGAAGCTCAAGTTAGTCCAGATTCCACCAGTTGTGACCGTTTTTGTCATACAAAAAACCATGGAGGAAGGCGCGTTAGACATTGTCAATCAATGGCAACGTGTCGCACCTATGTTAGACCCGAATCTTTTCATAAGAGCACAATTTAATGTCATACAAGGAAGCCAGGAGGAGAAAAGGACTGTGAAAGTGTCTTTCACAGCATTATTTTTAGGCCAAGCTAATGAGCTTGTCCAATTGGTTAACAAGGATTTTCCTCAATTGGGTTTACAGCACAATGATTGCCATGAGGTAAGTTGGATAGTATCACAACTGCTTTTCAATGGTTTGCCAATGAACAGTTCCCTTGAGATTTTTCTGCAGAGAGTCCCACCTATAGCTTTATCTTATGATAAACACAAGTCAGATTATGTTAAAGAGCCTATCCCCAAGGTGGGTTTAGAGGCATTATTAAGCAAGTTGATTGAACTAGAGAATGTAACCCTACAATTCAATCCCTACGGTGGGAGAATGAGCAAGATTCCAGAGACAGCAACACCATTTCCTCATAGGAAAGGGAACATCTTCAAGATTCAATACCTCACAAACTGGGTGCAAGATTCACAACAGATTACTTGTAGAAATCTTCTAGCAATGAGGGACATTTACAGTCTTATGACTCCTTATGTGTCGAAAAACCCAAGGGAGACGTATCTAAACTACAGGGATATTGATATCGGAACCAATGCAAACAGAAGTTATGATTTCGCACTAGACTACTTCAAGGGGAATCTCAAGAAGCTGTTAAAGGTAAAGGCAAAGGTTGATCCAAGCAATTTCTTCAGATATGAGCAGAGCATTCCTGTTTTCGTTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_114578.p1 GENE.R_Transcript_114578~~R_Transcript_114578.p1 ORF type:complete len:533 (+),score=73.47,FAD_binding_4|PF01565.19|3.1e-23,BBE|PF08031.8|1.3e-16 R_Transcript_114578:172-1770(+)
MKLKLKNSVQQASMIQILFVIIYVGNSVTTSASSINEFVDCLLQNSNSSNPIPAAIYTPKNSSFSSVLSAYVRNLRFNTSSTPKPLAIVAALDKFHVQATVFCAKAHGLEIRIRSGGHDFEGLSYVSPYPFVILDMFNLRSIDIDLPSQTAWVESGATVGELYHNIAKNSTIHAFPAGVCLTVGVGGHFSGGGYGTMLRKFGLTVDNIIDAEILDVNGKIPSRETMGEDLFWAIRGGGAASFCVVLAWKLKLVQIPPVVTVFVIQKTMEEGALDIVNQWQRVAPMLDPNLFIRAQFNVIQGSQEEKRTVKVSFTALFLGQANELVQLVNKDFPQLGLQHNDCHEVSWIVSQLLFNGLPMNSSLEIFLQRVPPIALSYDKHKSDYVKEPIPKVGLEALLSKLIELENVTLQFNPYGGRMSKIPETATPFPHRKGNIFKIQYLTNWVQDSQQITCRNLLAMRDIYSLMTPYVSKNPRETYLNYRDIDIGTNANRSYDFALDYFKGNLKKLLKVKAKVDPSNFFRYEQSIPVFVS*

Click here to download the sequence:
Link to NCBI Protein BLAST